Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq105 149 1e-30 seq1988 132 1e-25 >seq105 Length=629 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 || |||| ||| || || ||||| || || ||||||| ||| || ||||| ||||| | | Sbjct 585 AGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGAGT 526 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || |||||||||||||| || || |||||||||||| || || |||||| Sbjct 525 TGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATT 466 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 ||||| |||||||| || || | ||| || || || || | ||| || || ||||| Sbjct 465 TTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCCT 406 Query 288448 GTCAGAGTCTTGACGAATATCTGCATT 288474 || || |||||||| || ||||||||| Sbjct 405 GTGAGCGTCTTGACAAAGATCTGCATT 379 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | ||| ||||| |||| || || || ||||| || || || | Sbjct 379 TCCTCCTCGAAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGA 320 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || || || || | || ||||| |||||||| ||||| |||||| ||||| Sbjct 319 GAGAGTCCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGA---TCTGG 263 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || || || || || ||||| ||||| ||||| || || |||| ||| ||| || Sbjct 262 GGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTC 203 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||||||||| || || |||||||| ||||| || ||||| Sbjct 202 GACCTCCAAGGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATTTGCAT 152 >seq1988 Length=7662 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 ||||| | ||||| || || |||||||| || || | ||| ||||| || ||||| | Sbjct 3780 AGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGAGC 3721 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || |||||||| |||||||| || ||| || || || || || ||||| Sbjct 3720 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGATC 3661 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || || || ||||| || || | |||| || || || ||||||||||| ||||| || Sbjct 3660 TTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCA 3601 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| |||||||| Sbjct 3600 GTCAGGGTCTTTACGAAGATCTGCAT 3575 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || || || || || ||||| | | Sbjct 4882 CCACCACGGAGACGGAGGACAAGGTGGAGCGTACTCTCCTTCTGAATGTTGTAGTCAGAG 4823 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | ||| || || ||||||||||| |||||||| ||| Sbjct 4822 AGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGAGGG 4763 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || || || ||||| || || | ||| || || || Sbjct 4762 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATGGTGTCGGAAGACTCCACC 4703 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || |||| ||||||||||| || ||||| Sbjct 4702 TCGAGGGTGATAGTCTTACCCGTCAACGTCTTGACGAAGATTTGCAT 4656 Score = 123 bits (136), Expect = 6e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | ||| ||||| |||| ||||| || || || || || ||||| | Sbjct 4087 TCCTCCACGCAGACGAAGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGA 4028 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || || || | || ||||| || ||||||| ||| || || | || Sbjct 4027 AAGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGG 3968 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| || || || || || || || | || || || || Sbjct 3967 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGAC 3908 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||| ||||||||||| || |||| ||||||||||| |||||||| Sbjct 3907 TTCGAGGGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 Score = 120 bits (132), Expect = 7e-22 Identities = 148/201 (74%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 || || || || ||||| || || |||| ||| ||||| || || || | || || || Sbjct 4284 GTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAAGCTGCTTGCCA 4225 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT 288393 |||||||| |||||||| || ||||| || || || || |||||||| || || Sbjct 4224 GCGAAGATGAGACGCTGCTGG---TCTGGCGGAATACCCTCCTTGTCCTGGATCTTTGCC 4168 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || ||||| || || | || ||| || || || || ||||| ||||| ||||||| | Sbjct 4167 TTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCGGTCAAA 4108 Query 288454 GTCTTGACGAATATCTGCATT 288474 ||||||||||| ||||||||| Sbjct 4107 GTCTTGACGAAGATCTGCATT 4087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179497981881622