Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2980 89.7 1e-12 seq176 89.7 1e-12 >seq2980 Length=15283 Score = 89.7 bits (98), Expect = 1e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || ||||| |||||||| | |||||| | || ||||| || ||||| |||||||| | Sbjct 14700 CTCATTGGTATGAACTCCAAGCTCATGTGCCAATACATTGAGTTCGTCGCCGACCGTCTG 14759 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || || | ||| | || ||||||||| | |||||||| | ||| ||||| Sbjct 14760 TTGGCTGCTTTGGGTAACCCCAAGGTGTACAACGTAACCAACCCCTTCGACTTCATGGAT 14819 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | || ||||| || || || || ||||||||||| ||||| || Sbjct 14820 ATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGAGT 14863 >seq176 Length=24199 Score = 89.7 bits (98), Expect = 1e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || |||||||||||||| | | ||| | || |||||||| ||||| || ||||| | Sbjct 20054 CTCATTGGCATGAACTCGAAGTTGATGTGTCAATACATCGAGTTCGTCGCTGACCGTCTC 20113 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || || | || | || ||||||||| | |||||| || | ||| ||||| Sbjct 20114 TTGTGTGCCTTGGGCAACCCTAAGGTGTACAACGTGACGAACCCTTTCGACTTCATGGAC 20173 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | || || |||||||| || || ||||||||||| |||||||| Sbjct 20174 ATGATCTCTCTTCAAGGCAAGACAAACTTCTTCGAGAAGCGTGT 20217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102733761903150