Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq8888 114 5e-21 >seq8888 Length=1080 Score = 114 bits (126), Expect = 5e-21 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 5142 AGCCCGACATCCTGCTCACGGAGATTCACCGCCAGGCCCAGGACAACCCGATCATCTGGA 5201 |||||||| | |||| |||||||||||||||||||| |||||||| |||||||| | | Sbjct 180 AGCCCGACGTGATGCTGACGGAGATTCACCGCCAGGCGCAGGACAATCCGATCATTCGCA 239 Query 5202 TGTCCAAGGAGGTCCGCGAGGGCCGCGTGCTCCGCCCCGGCGACTACGGGGCCAGCCGCG 5261 || || ||| || ||||||||||| | |||| |||||| |||||| | |||||||| Sbjct 240 TGAGCATGGACGTGCGCGAGGGCCGAGGCCTCCAGCCCGGCACCTACGGCGACAGCCGCG 299 Query 5262 T 5262 | Sbjct 300 T 300 Score = 82.4 bits (90), Expect = 3e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 5626 CTATGGCTATGCGCTCACCGTCCACAAGTCGCAGGGCTCCCAGTGGAACAACGTCCTGCT 5685 ||| ||||| ||||| ||||| ||||||||||||||||| ||||||||| |||||||| | Sbjct 694 CTACGGCTACGCGCTGACCGTGCACAAGTCGCAGGGCTCTCAGTGGAACGACGTCCTGGT 753 Query 5686 GTTTGACGAG 5695 | | || ||| Sbjct 754 GGTCGATGAG 763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187576945015250