Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1988 116 4e-21 seq105 95.1 1e-14 seq2980 87.8 2e-12 >seq1988 Length=7662 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| || | ||||| ||| || ||||| |||||||| | Sbjct 4051 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAA 3992 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 |||||| || ||||| || ||||| ||||||||||||||| ||| || ||||| | Sbjct 3991 GATCAAACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATT 3932 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||| | ||||||||||| ||| | ||| ||||| |||| || || || Sbjct 3931 GTCGATCGTGTCAGAGGACTCGACTTCGAGGGTGATCGTCTTGCCCGTCAACGTCTTGAC 3872 Query 127102 AAAAATCTGCAT 127113 || |||||||| Sbjct 3871 GAAGATCTGCAT 3860 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 126911 TGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGT 126970 |||| ||| ||| || || || ||||||||| | |||||| ||| || ||||| Sbjct 4290 TGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAAGCTGC 4231 Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 || |||||| |||| | |||||||| || || || || |||||||||||| ||| || Sbjct 4230 TTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTT 4171 Query 127031 TGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 ||||| |||| |||| ||||| | |||||| || | || | || || ||||| Sbjct 4170 GCCTTGACGTTG-TCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCGGT 4112 Query 127090 CAGAGTTTTTACAAAAATCTGCAT 127113 || ||| || || || |||||||| Sbjct 4111 CAAAGTCTTGACGAAGATCTGCAT 4088 Score = 100 bits (110), Expect = 3e-16 Identities = 142/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || ||||||||||| | ||||| ||| || ||||| || || ||| | Sbjct 3766 CTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 3707 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||| | |||||||| ||||| || || ||||||||||| ||| || ||||| ||| Sbjct 3706 GATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGATCTTTGCCTTGACGTT 3647 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | || | ||| || | |||||| |||| || | || ||||| ||||| || |||| Sbjct 3646 G-TCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCAGTCAGGGTCTTTA 3588 Query 127101 CAAAAATCTGCATGGCT 127117 | || ||||||||| || Sbjct 3587 CGAAGATCTGCATGACT 3571 Score = 98.7 bits (108), Expect = 9e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || ||||||||||| || ||||| ||| || || || || || Sbjct 4566 GTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAAGTTGCTTACCG 4507 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035 || |||| | || || || || ||||| ||||||||||||| | ||| | | || ||| Sbjct 4506 GCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGT-CTTGAATCTTTGCCTT 4448 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| ||| || | | |||||| || | ||| | || |||||||||| ||| Sbjct 4447 AACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCAAAGT 4388 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 4387 CTTCACGAAGATCTGCAT 4370 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 |||| ||| || ||||| ||||| || | || ||| || || || || || || Sbjct 4853 CGTACTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTACGACCGTCCTCGAGTTGCTTGCC 4794 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 |||| |||||| |||||| || |||||||| || |||||||||||| || || ||| Sbjct 4793 AGCGAAGATCAGTCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTGGCCTT 4734 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 || | |||| |||||| | | ||| || |||| ||| | || || || |||| || Sbjct 4733 GACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAACGT 4674 Query 127096 TTTTACAAAAATCTGCATG 127114 || || || || |||||| Sbjct 4673 CTTGACGAAGATTTGCATG 4655 >seq105 Length=629 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || |||||||| | || || ||| || ||||| |||||| Sbjct 348 GTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTCCGGCCATCCTCGAGCTGCTTTCCA 289 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || || ||||| || || |||||||||||||| ||| ||| ||| Sbjct 288 GCGAAGATGAGACGTTGTTGATCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTC 229 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | |||||| || | ||| | ||| ||||| || ||||| Sbjct 228 ACATTGTCAATAGTGTCGGACGACTCGACCTCCAAGGTGATCGTCTTGCCCGTGAGAGTC 169 Query 127097 TTTACAAAAATCTGCAT 127113 || || || || ||||| Sbjct 168 TTAACGAAGATTTGCAT 152 >seq2980 Length=15283 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 47412 GGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTT 47471 || |||||||| | | ||| | |||| ||||| || || ||||||||||| ||||| Sbjct 11775 GGCATGAACGCAGCACTCATGCGTCAGTATATCGAGTTCGTTGCCGACCGCCTCCTCGTC 11716 Query 47472 CAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATT 47531 || |||||||| ||| || ||| ||| |||||||| || ||| | | || Sbjct 11715 TCCCTCGGAAATCCCAAGTACTACAACTCCGCGAACCCATTCGACTTCATGGATATGATC 11656 Query 47532 TCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATAT 47579 || | | ||||||||||||||||| |||| ||| ||| |||||| Sbjct 11655 TCATTGCAAGGCAAGACCAACTTTTTTGAGAGGCGTGTCTCAGAATAT 11608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475439288027760