Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq105 87.8 2e-12 seq1988 84.2 2e-11 >seq105 Length=629 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | ||| || || ||| | |||| ||||||||||| || || || ||||| || Sbjct 535 ATCTTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTT 476 Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 ||||| ||||| || | || | || | ||||||||||||||||| || | |||| Sbjct 475 GTCTTGGATTTTCGCCTTCA-CGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAA 417 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || || || || ||||| || ||||| Sbjct 416 TGGTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCAT 380 >seq1988 Length=7662 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAAT 45194 || || || || || ||||| |||||||| ||||| | ||| ||| || | | Sbjct 4575 AGGTGGAGGGTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAAGT 4516 Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || || | || | ||||| ||||| || |||||||| || || |||||||| Sbjct 4515 TGCTTACCGGCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAATC 4456 Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314 ||| || | || | ||| || ||||||||||| || || || | || |||||| Sbjct 4455 TTTGCCTTAACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGCCG 4396 Query 45315 GTTAGAGTTTTTACAAAAATTTGCAT 45340 || | ||| || || || || ||||| Sbjct 4395 GTCAAAGTCTTCACGAAGATCTGCAT 4370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451944727736040