Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq9599 105 3e-18 seq9689 93.3 2e-14 >seq9599 Length=603 Score = 105 bits (116), Expect = 3e-18 Identities = 379/568 (67%), Gaps = 40/568 (7%) Strand=Plus/Plus Query 55059 GGCCCGCCGAAGAAGGGCGAGGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCC 55118 |||| |||| | |||||||| |||||| ||||| |||||| | || ||||| ||| Sbjct 26 GGCCGGCCGCAAAAGGGCGACGACATCCTCCTGTCGGTGATCACCGATGGCCGCCACTCG 85 Query 55119 GCGATCGACATGCGCTTCGTTGACCCGACCG-CGCCGAGCGACCCGAACAGCAAGCTGAA 55177 ||||||||| |||| ||||| ||| || | || | | ||| | || |||||| || Sbjct 86 GCGATCGACCTGCGGTTCGTCGACGCGGATGTCGGCAA-CGAGGAGGGCAACAAGCTCAA 144 Query 55178 CCAGATGATCGA-------CGCCGTGATC--GC-CGACTACCACGCGGCATCCGACTTCG 55227 | ||||||| | |||| ||| || ||| ||| | ||| || || || | Sbjct 145 TCTCCTGATCGAGAATGTCCACCGT-ATCTGGCGCGA-TACGA-GCGACAATCG-CTACA 200 Query 55228 AGTATTCGACGAA--CGGCAAGGTCGACCCGATCAAGGGCGCGTCGCACATCATCTTCAC 55285 || | |||| ||||| | | | ||| | || ||| ||| || |||||| | Sbjct 201 CCGATCC--CGAAACCGGCAGGCCCTATCCGCTGCCCGGGGCGGTGCAGATGATCTTCTC 258 Query 55286 CGACATCGGGCTCGGCGAGCAGTCGGCGAAGAACCGCGGCTTCGACATGAAGGCGTGGAT 55345 ||| |||| | | | || | | | ||| || ||||||||| | | | ||||| Sbjct 259 CGATCTCGG-CACCGAGAAC-GCCATCGA-GACACGCGGCTTCTCCGCCTATGTCTGGAT 315 Query 55346 C-GAGAAGCGCCTGACGGACGGCGGCGTGCCGCGCGAGCAGATCGCGTTCATGCGCGACA 55404 | | ||| | |||| || ||| | ||| ||| |||||||| ||||||| | Sbjct 316 CCGCGAA-CAACTGATCGAGATGGGCATACCGGCCGATCAGATCGCCTTCATGCAGCATT 374 Query 55405 ACAAGGAGCAC-GCGAAGAAGGAGCGCCTGTTCGCGGACATGCGCGAGGGCAAAAAGCG- 55462 ||||| || || ||| |||| ||||||||||| || | | |||| ||||| Sbjct 375 ACAAGAAGAACAGCGC-GAAGCAGCGCCTGTTCAACGATCTCAACCAGGGGCGCAAGCGG 433 Query 55463 --CGTGCTG--ATCGGCGGCAAGGACATGGAAACCGGCGTCAACGTGCAGAAGCGCCTCT 55518 ||| ||| |||| | || | ||||| ||||||||||||| |||| ||||||| Sbjct 434 TTCGTTCTGGGATCGACCGCGAC--CATGGGCACCGGCGTCAACGCGCAGCAGCGCCTGA 491 Query 55519 ACACCGAGGAGCATCTGGACGCGCCGTGGTTCCCGGCATCCG---TCGAGCAGCGCGAGG 55575 | || | | ||||| |||| || ||| | | |||||| |||||||||| || | Sbjct 492 AAGCCCTGCATCATCTCGACGTTCCCTGG---CTGCCATCCGATATCGAGCAGCGGGAAG 548 Query 55576 GCCGCATCATCCGTCAGGGCAACCAGAA 55603 | |||||| || |||||||||||||| Sbjct 549 GGCGCATCGAGCGCCAGGGCAACCAGAA 576 >seq9689 Length=695 Score = 93.3 bits (102), Expect = 2e-14 Identities = 191/279 (68%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 9097 CAAAGGAGCCCAGCATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCG 9156 ||| ||||| | ||||||||| |||| ||||| ||||| ||||||| |||| || Sbjct 190 CAACGGAGCA-ACCATGGCATCAATCAATAAAGTTATCCTGATCGGCAACGCCGGCCGCG 248 Query 9157 ACCCGGAAACCCGCTACCTCCCGAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGA 9216 || || | ||| || ||| ||||||| || |||| | | |||| || | Sbjct 249 ACGTCGAGTCGCGCACGTTCTCGAACGGCGACATGGTCACCAACGTGTCTATCGCCACCA 308 Query 9217 CCGATCGCTACAAGGACAAGGCGAGCGGCGAGTTCAAG---GAAGTGACCGAGTGGCACC 9273 |||| || ||||||||| | |||||| ||| |||| ||||||||||||| Sbjct 309 CCGAGACCTGGAAGGACAAGCAGTCTGGCGAG---AAGCGCGAAGCCACCGAGTGGCACC 365 Query 9274 GCGTCGCTTTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGCACCTTCGCAAGGGCGCAT 9333 || | | ||| |||| |||| || || | | | ||| || | |||||| | | Sbjct 366 GCCTGTCGTTCGGCGGCGGCCTGGCAAAGGTGGCGGCCGACTACATCAAAAAGGGCACGT 425 Query 9334 CGGTCTACATCGAGGG-GCGCATCAAGACGCGGAAGTGG 9371 || ||||| ||||||| ||| |||||||||| |||||| Sbjct 426 CGATCTACGTCGAGGGCTCGC-TCAAGACGCGCAAGTGG 463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200537903276964