Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2980 152 6e-32 seq176 111 2e-19 seq1547 100 3e-16 >seq2980 Length=15283 Score = 152 bits (168), Expect = 6e-32 Identities = 364/539 (68%), Gaps = 11/539 (2%) Strand=Plus/Minus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||||||| ||| | |||||||||||| || || ||||| | ||| |||||| Sbjct 14512 CCCTCGTCACGGCTGATCAACTCATTCGAGAAGGTCAAGCCAGGCATCAAACCACGCTTC 14453 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 |||||||| || || | || ||||| ||||||||||| ||||| || |||||| Sbjct 14452 TTCAACCAAAAGATAGATGCGAAAGAGCCGGAGAAGAAGATACCCTCGACGGCGGCGAAC 14393 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACTG 127716 || | |||||||||| || | | | |||| | | ||| || ||||| | Sbjct 14392 GCGACAAGACGCTCGGAGAATG-CAGAGTTCTTGTCCGAGATCCAGCGCAAGGCCCAGTC 14334 Query 127717 TGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTTCTG 127775 ||||| |||| ||| || || | ||||| ||| || || ||||| | || | || || Sbjct 14333 AGCCTTCTTCTTGATGCAAGGAATGGTCTCGATAGCATCGAAGAGGTGCTCGCGTTGCTT 14274 Query 127776 ATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TTCA 127834 | || || |||||||| | || ||||| || ||||| || |||| | | || Sbjct 14273 A-GGGTCCTTGATGTATGTGTCGATGAGAAGGGAGTATGTCTCTGAATGGATGTTCTCCA 14215 Query 127835 TTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC-GCTTATCTGTACCTCATCGGCAAA 127893 | || | || | ||||||| | || ||||| ||| | || ||||| | || || Sbjct 14214 TCAT-GATTTGGAAGCCGTAGAAGCAACGAGCTTCAGCTGCT-TGAACCTCGTTGGAGAA 14157 Query 127894 ATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATA 127953 | || ||||| ||||| ||||| || ||||||| || || |||| | Sbjct 14156 CCGCTCGACGAGGTTCTCGTTGACAATACCATCCGAGGCAGCAAAGAAGGCGAGGACGTG 14097 Query 127954 CTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTCGTCGAGATCCTTTGA 128010 ||||| | ||||||| ||||| || | | | |||||||| ||| ||||| || Sbjct 14096 TGAGATGAAGTGACGTTCATTGTCGTTGAGTCTGTTGTCCCAGTCGTGGAGGTCCTTCGA 14037 Query 128011 GAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCTTATAGAGTTCCCAGA 128069 | ||| | |||||| |||||||| | | || |||||||||||| | || ||||| Sbjct 14036 CAAATCCATCTCCTCAGCAGTCCAGAAGGACGCTTCAGCCTTCTTATACATTTGCCAGA 13978 Score = 100 bits (110), Expect = 3e-16 Identities = 333/507 (66%), Gaps = 17/507 (3%) Strand=Plus/Plus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||| | ||| || ||||||||| | ||| ||||||||||| |||| ||| Sbjct 11984 CCCTCGTCTCTACTGATCAGCTCATTCGAGTACGTCAGTCCTGGCATGAGGCCCCTCTTT 12043 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 |||||||| |||||||| || ||||||| ||||| || || || || || || Sbjct 12044 TTCAACCAAAAAATCGCCGCGAAACAGCCAGAAAAGAATATGCCTTCTACCGCTGCAAAG 12103 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCATCGCCCAC 127714 || | ||||| || || || | |||| | ||| | |||| | |||||| Sbjct 12104 GCGACGAGACGTTCTGCGAACG---TAGACTGTTGATCTGATATCCACCGAAGAGCCCAC 12160 Query 127715 TGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 127774 | ||||| |||| |||||| || | |||| ||| || || || | | ||| | || Sbjct 12161 TCGGCCTTCTTCTGGATACAGGGAATAGTCTCGATAGCGTCGAATAAGT-ATTC-TCGCT 12218 Query 127775 GATGGA--TCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-T 127831 | | || |||| |||||| |||| ||||| || || || || |||| | | Sbjct 12219 GCTTGACGTCTTGGATGTAGGTATCAATGAGGAGGGAGTACGTCTCTGAATGGATGTTCT 12278 Query 127832 TCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCA 127891 ||| || | || | ||||||| | || ||||| | ||| ||||| | | | Sbjct 12279 CCATCAT-GATTTGGAAGCCGTAGAAGCAACGAGCTTCAGCTGCCTGCACCTCGTTCG-A 12336 Query 127892 AAATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGAT 127950 ||| ||| || ||||| || || |||||||| ||||| || || || || | Sbjct 12337 GAATCGTTCGACGAGGTTCTCGTTGACGATCCCATCGGAGCCAGCGAAGAAGGCGAGTAC 12396 Query 127951 ATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTT 128007 | | ||||| | |||| || ||||||| |||| | |||||| | ||||| | Sbjct 12397 GTGCGAGATGAAATGACGTTCGTTATCGTTCAGACGGGTGTGCCAGTCTACCAGATCGTG 12456 Query 128008 TGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||| || | ||| || || ||||| Sbjct 12457 CGAGAGGTCGATCTCTTCGGCTGTCCA 12483 >seq176 Length=24199 Score = 111 bits (122), Expect = 2e-19 Identities = 336/506 (66%), Gaps = 15/506 (3%) Strand=Plus/Minus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||| ||| ||| |||||||| ||||| || || ||||||||||| | |||| Sbjct 19865 CCCTCGTCGCGGCTGATCAGTTCATTGGAGAACGTCAAGCCAGGCATGAGACCTCTCTTC 19806 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 || | |||||| || | ||| ||||| ||||||||||| || || || || || Sbjct 19805 TTGAGCCAGAAGATGGACGCAAACGAGCCCGAGAAGAAGATTCCTTCAACCGCAGCAAAG 19746 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGTATCA-AACCACTTCATCGCCCAC 127714 |||| || || ||||| || | ||||| |||| | | | ||| | ||||| Sbjct 19745 GCAACGAGTCGTTCGGCGAACG---CGGACTTCTTGTCTGAGATCCAGCGTAAAGCCCAG 19689 Query 127715 TGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 127774 | ||||| |||| ||| || || | || | ||| || || ||||| | || | || Sbjct 19688 TCAGCCTTCTTCTTGATGCAAGGAATCGTTTCGATGGCGTCGAAGAGATGCTCCCGTTGG 19629 Query 127775 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TTC 127833 | | |||||||||||| |||| ||||| ||||| || ||| ||| | | | | Sbjct 19628 GTCTGGTCTTTGATGTACGTATCGATGAGGAGGGAATACGTCTCGGAGTGAATGTTCTCC 19569 Query 127834 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC-GCTTATCTGTACCTCATCGGCAA 127892 || || | || | | ||||| |||| || || ||| | || || || | || | Sbjct 19568 ATCAT-GATTTGGAAGCCATAGAAGCAGCGGGCCTCAGCTGCT-TGGACTTCGTTGG-AG 19512 Query 127893 AATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATA 127951 || ||| | || |||||| ||||| || || || | || || || || || | | Sbjct 19511 AACCGTTCAACGAGATTCTCGTTGACAATACCGTCCGAAGCCGCGAAGAAAGCAAGAACA 19452 Query 127952 TACTTTATGAATTTCTGTTCATTCTCGTTCA--GGGTCTT-CCAGTCGTCGAGATCCTTT 128008 | ||||| | | || || ||||||| ||| || |||||||| | ||| || Sbjct 19451 TGAGAGATGAAATGGCGCTCGTTGTCGTTCAACCGGTGTTGCCAGTCGTGCATATCTTTC 19392 Query 128009 GAGAGATCTACCTCCTCCGCAGTCCA 128034 || || || | ||| ||||| ||||| Sbjct 19391 GACAGGTCCATCTCTTCCGCTGTCCA 19366 >seq1547 Length=32498 Score = 100 bits (110), Expect = 3e-16 Identities = 225/331 (68%), Gaps = 19/331 (6%) Strand=Plus/Plus Query 12787 TATCGAAGCCATCCATCTCAGTCAAG-AGTTGATTGATGGTTTGTTCACGTTCATCATTC 12845 || |||| || |||||||| |||| || || |||| ||||| || || || ||||| Sbjct 25943 TACCGAAACCGTCCATCTCCA-CAAGCAGCTGGTTGAGCGTTTGCTCGCGCTCGTCATTG 26001 Query 12846 GCGGGCATACCACCC---GCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAA 12902 | | ||| | | ||||| || | ||| |||| ||| || |||||||| ||||| Sbjct 26002 CCCCCGAAACCGCTCTTCGCACTACGCTTCTTCCCGATGGCATCGATTTCGTCGATGAAG 26061 Query 12903 ACGATACACGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACC 12961 | ||| ||||| || ||| || | | | || | ||| ||||||| | || ||| Sbjct 26062 ATGATGCACGGCGCGTTCTTCTTGGCCGAAG-CGAACAGATCCCGCACTCGCGAGGAACC 26120 Query 12962 GACACCCACAAACATCTCCACAAAAT-TG-----GCGGCGGAACATTGGATGAAGGGGAC 13015 |||||| ||||||||||| || || | || | | ||||| | ||| || || Sbjct 26121 GACACCAACAAACATCTCGACGAATTCTGAACCAGAGACGGAA------AGGAAAGGTAC 26174 Query 13016 GTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCCGC 13075 ||||| |||||| || | ||| || || | ||| || || || || || || | Sbjct 26175 GTTGGCTTCACCTGCTGTCGCTTTCGCCAGCAAGGTTTTACCGGTACCGGGAGGACCAGA 26234 Query 13076 GAGAAGGGCACCACGTGGGATCCTGGCACCA 13106 ||||| ||||| ||||| ||| |||||||| Sbjct 26235 GAGAATAGCACCTCGTGGAATCTTGGCACCA 26265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613427835174840