Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq176 107 3e-18 seq2980 100 5e-16 >seq176 Length=24199 Score = 107 bits (118), Expect = 3e-18 Identities = 370/569 (65%), Gaps = 6/569 (1%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 |||||||||||||| ||||| |||| |||||||| || ||| | || ||||| Sbjct 19895 AACAGGAGGCACGCGAAGTCAGTATGCATGCCCTCGTCGCGGCTGATCAGTTCATTGGAG 19836 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | ||| ||||||| || | | |||||||| || |||| |||||| | || Sbjct 19835 AACGTCAAGCCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGACGCAAACGAGCCC 19776 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||| || || || || ||||| || ||||| | || | || | || || Sbjct 19775 GAGAAGAAGATTCCTTCAACCGCAGCAAAGGCAACGAGTCGTTCGGCGAACGCGGACTTC 19716 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153 |||| | |||| | | ||||| ||||||||||| |||||| || || ||| Sbjct 19715 TTGTCTGAGATCCAGCGTAAAGCCCAGTCAGCCTTCTTCTTGATGCAAGGAATCGTTTCG 19656 Query 160154 ACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTC 160213 | ||||| || | ||| | | || || ||||| ||| | || || Sbjct 19655 ATGGCGTCGAAGAGATGCTCCCGTTGGGTCTGGTCTTTGATGTACGTATCGATGAGGAGG 19596 Query 160214 GAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCC 160273 || ||| | || | ||| | || || || || || ||| ||||| | ||| Sbjct 19595 GAATACGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAGCCATAGAAGCAGCGGGCC 19536 Query 160274 TCCAGATAC-TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTC 160332 | ||| | | || || || | | ||||| || | | ||||| | || || | ||||| Sbjct 19535 T-CAGCTGCTTGGACTTCGTTGGAGAACCGTTCAACGAGATTCTCGTTGACAATACCGTC 19477 Query 160333 GGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCT 160392 | ||||| |||||||| | || |||||||||||||| | ||||| | ||| | | Sbjct 19476 CGAAGCCGCGAAGAAAGCAAGAACATGAGAGATGAAATGGCGCTCGTTGTCGTTCAACCG 19417 Query 160393 CTTTTCCCAGT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA-ATTGGCA 160450 | || ||||| ||| || |||| | || || | ||||||||| |||| | || | Sbjct 19416 GTGTTGCCAGTCGTG-CATATCTTTCGACAGGTCCATCTCTTCCGCTGTCCAGAATGAC- 19359 Query 160451 GCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 || | || | |||||||| |||||| Sbjct 19358 GCTTCGGCTTTCTTGTACATTTGCCAGAT 19330 >seq2980 Length=15283 Score = 100 bits (110), Expect = 5e-16 Identities = 366/568 (64%), Gaps = 4/568 (1%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || | ||| ||||||||| |||| |||||||| || ||| ||||| || || Sbjct 14542 AAGAGCAAGCAAGCAAAGTCGGTATGCATGCCCTCGTCACGGCTGATCAACTCATTCGAG 14483 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | | ||| ||||| | |||||| || | |||||| || | || |||| ||| Sbjct 14482 AAGGTCAAGCCAGGCATCAAACCACGCTTCTTCAACCAAAAGATAGATGCGAAAGAGCCG 14423 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||| ||||| ||||| || ||||| || || | ||| || | | ||| Sbjct 14422 GAGAAGAAGATACCCTCGACGGCGGCGAACGCGACAAGACGCTCGGAGAATGCAGAGTTC 14363 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153 |||| | |||| | |||||| ||||||||||| |||||| || ||| |||| Sbjct 14362 TTGTCCGAGATCCAGCGCAAGGCCCAGTCAGCCTTCTTCTTGATGCAAGGAATGGTCTCG 14303 Query 160154 ACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTC 160213 | || | || | || | | ||| |||||||| || | || || Sbjct 14302 ATAGCATCGAAGAGGTGCTCGCGTTGCTTAGGGTCCTTGATGTATGTGTCGATGAGAAGG 14243 Query 160214 GAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCC 160273 ||||| | |||| || | || || || || || ||| |||||| | | | Sbjct 14242 GAGTATGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAG-C 14184 Query 160274 TCCAGATAC-TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTC 160332 | ||| | | || ||||| | | ||||| | | || || | || || | || || Sbjct 14183 TTCAGCTGCTTGAACCTCGTTGGAGAACCGCTCGACGAGGTTCTCGTTGACAATACCATC 14124 Query 160333 GGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCT 160392 | ||| |||||||| || | ||||| |||||||| || | || | | ||||||||| Sbjct 14123 CGAGGCAGCAAAGAAGGCGAGGACGTGTGAGATGAAGTGACGTTCATTGTCGTTGAGTCT 14064 Query 160393 CTTTTCCCAGT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAG 160451 || ||||||| ||| | ||| | | |||||| | ||| || || |||| || | Sbjct 14063 GTTGTCCCAGTCGTG-GAGGTCCTTCGACAAATCCATCTCCTCAGCAGTCCAGAAGGACG 14005 Query 160452 CCTGAGCAGTTTTGTACATGGCCCAGAT 160479 | | ||| | || ||||| |||||| Sbjct 14004 CTTCAGCCTTCTTATACATTTGCCAGAT 13977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795052336735440