Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq105 143 6e-29 seq1988 116 9e-21 seq4155 105 2e-17 seq2768 96.9 8e-15 seq3402 87.8 4e-12 >seq105 Length=629 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | ||||| ||||| || || |||||||| |||| |||||| |||| | ||| Sbjct 373 TCGAAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGT 314 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 || ||||| || ||||||||||| |||||||||||||| || || || || ||| || Sbjct 313 CCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCTGGGGGAATGCC 254 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || || || ||||| |||||| || | ||||| | | || || ||||| Sbjct 253 CTCCTTGTCTTGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCGACCTCCAA 194 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| ||||||||||| || || || ||||| Sbjct 193 GGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATTTG 155 Score = 93.3 bits (102), Expect = 1e-13 Identities = 77/93 (83%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||| || ||||||||||| ||||| | || ||| | ||||||||| ||||||| Sbjct 1 ATCTTCGCTGGCAAGCAGTTGGAGGATGGTCGTACCTTGTCGGATTACAACATCCAGAAG 60 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAG-ACTTCG 201029 ||||| ||||||||||||| | || | |||||| Sbjct 61 GAGTCCACTCTTCACCTTGGTGTGTGCACTTCG 93 >seq1988 Length=7662 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||| || | ||||||||||| | ||| | || || Sbjct 4867 AGGACAAGGTGGAGCGTACTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTACGACCGTCC 4808 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || |||||||| || ||||| ||||| ||| || || || ||| Sbjct 4807 TCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCC 4748 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 4747 TGAATCTTGGCCTTGACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 4688 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| | || || || || ||||| Sbjct 4687 TTACCCGTCAACGTCTTGACGAAGATTTG 4659 Score = 113 bits (124), Expect = 1e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||||||||| || |||||||| |||| ||||| || | || || | ||||| || | Sbjct 4577 CAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAA 4518 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 | ||||| ||||| ||||||||||| || ||||| ||| ||| || || || |||| Sbjct 4517 GTTGCTTACCGGCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAA 4458 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 ||||| ||| || |||| ||| || | | || || |||| ||||| ||||| | Sbjct 4457 TCTTTGCCTTAACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGC 4398 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || | ||| ||||| || || || Sbjct 4397 CGGTCAAAGTCTTCACGAAGATCTG 4373 Score = 109 bits (120), Expect = 1e-18 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| ||||| || |||||| |||| ||||| || | | ||| | |||||||| | Sbjct 3782 CAAGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGA 3723 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| |||||||||||||||||||||||||| || ||| || || || || | Sbjct 3722 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGA 3663 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 ||||| ||| ||| || | ||| || | | || || || | |||||| ||||| | Sbjct 3662 TCTTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGC 3603 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || || || || || || || || Sbjct 3602 CAGTCAGGGTCTTTACGAAGATCTG 3578 Score = 104 bits (114), Expect = 6e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 ||||||| || || |||||| |||| |||||| || | | || | ||||| || | Sbjct 4295 CAAGGTGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAA 4236 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || ||||||||||||||||||||||| || ||| || || ||||| | Sbjct 4235 GCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGA 4176 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 ||||| ||| ||| |||| ||||| | | || || || | ||||| ||||| | Sbjct 4175 TCTTTGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTC 4116 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || | ||| || || || || || Sbjct 4115 CGGTCAAAGTCTTGACGAAGATCTG 4091 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || |||||| || | ||||||||||| | || | ||||| Sbjct 4071 AGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 4012 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || ||||| | ||| |||||||| ||| ||| || || ||| Sbjct 4011 TCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 3952 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||||| | | || || || | ||||||||| Sbjct 3951 TGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGACTTCGAGGGTGATCGTC 3892 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || || || || || || Sbjct 3891 TTGCCCGTCAACGTCTTGACGAAGATCTG 3863 >seq4155 Length=6849 Score = 105 bits (116), Expect = 2e-17 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || ||||| || || | ||||||||||| || ||||| || || Sbjct 91 AGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTCCTGCCGTCC 150 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||||||||| |||||||||||||| || ||||| || Sbjct 151 TCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGGTCAGG 191 >seq2768 Length=3315 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || |||||||| |||| ||||||||| ||||||||| ||||| Sbjct 2819 AGGACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCACTCAAAGTCCTGCCATCC 2878 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| |||||||||||||| || || || || || Sbjct 2879 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGTTGATCGGG 2919 >seq3402 Length=1793 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || |||||||||||||||| |||||| || | ||| | ||||| Sbjct 1395 AGGACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTGAGAGTGCGACCATCC 1454 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| || ||||||||||| || Sbjct 1455 TCGAGCTGCTTGCCCGCGAAGATCAGTCGCTGCTGGTCGGG 1495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178765279048383