Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1988 141 1e-28 seq105 136 4e-27 seq3402 86.0 7e-12 >seq1988 Length=7662 Score = 141 bits (156), Expect = 1e-28 Identities = 157/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447 ||||| | || |||||||| ||||||||||| || || |||||||| | || |||||| Sbjct 3780 AGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGAGC 3721 Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507 |||||||||||||| || | ||||||||||||| || | | ||||||||| |||| Sbjct 3720 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGATC 3661 Query 46508 TTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCC 46566 || ||||| ||| | | | || ||| || || || || | ||||||||| ||||| Sbjct 3660 TTTGCCTTGA-CGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCC 3602 Query 46567 CGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || ||||| ||||| Sbjct 3601 AGTCAGGGTCTTTACGAAGATCTGCAT 3575 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 ||||||||||| ||||| ||||| ||||| || ||||| | || || ||||||||||| Sbjct 4284 GTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAAGCTGCTTGCCA 4225 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| || | ||||||||||| | ||| | | |||||||||| |||||| |||| Sbjct 4224 GCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTTGCCTTG 4165 Query 46517 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575 | ||| | | | |||||| ||| || || || | |||||||| || || |||| || Sbjct 4164 A-CGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCGGTCAAAGT 4106 Query 46576 TTTAACAAAGATTTGCATT 46594 || || ||||| |||||| Sbjct 4105 CTTGACGAAGATCTGCATT 4087 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 ||||||||||| || || |||||||| || ||||| || |||| ||||| |||||||| Sbjct 4852 GTACTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTACGACCGTCCTCGAGTTGCTTGCCA 4793 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| |||| ||||| ||||||| || | | |||||||||| ||||| |||| Sbjct 4792 GCGAAGATCAGTCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTGGCCTTG 4733 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 | | | | |||||| || ||||| || | ||||| || || ||||||| ||| Sbjct 4732 ACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAACGTC 4673 Query 46577 TTAACAAAGATTTGCAT 46593 || || ||||||||||| Sbjct 4672 TTGACGAAGATTTGCAT 4656 Score = 122 bits (134), Expect = 1e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| || || |||||||| || || ||||| | || ||||||||||| || Sbjct 4056 GTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCA 3997 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 || || ||||| || |||||||| | || | || |||||||||| |||||| |||| Sbjct 3996 GCAAAGATCAAACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTG 3937 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 | | | | |||||| || || || || | ||||| || |||||||||| ||| Sbjct 3936 ACATTGTCGATCGTGTCAGAGGACTCGACTTCGAGGGTGATCGTCTTGCCCGTCAACGTC 3877 Query 46577 TTAACAAAGATTTGCAT 46593 || || ||||| ||||| Sbjct 3876 TTGACGAAGATCTGCAT 3860 >seq105 Length=629 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 |||||||||||||| || ||||||||||| || || || | || ||||| |||||||| Sbjct 576 GTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGAGTTGCTTGCCA 517 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| |||| || |||||||||| || | | |||||||| ||| ||| ||| Sbjct 516 GCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATTTTCGCCTTC 457 Query 46517 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575 | ||| | | | ||||||| || || || |||| ||| |||||||| || || ||||| Sbjct 456 A-CGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCCTGTGAGCGT 398 Query 46576 TTTAACAAAGATTTGCATT 46594 || |||||||| |||||| Sbjct 397 CTTGACAAAGATCTGCATT 379 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | ||| | || || || | ||| |||||| ||||| ||||| || || Sbjct 378 CCTCCTCGAAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAG 319 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || ||||||||||| || ||||| || | || || || || | || Sbjct 318 AGAGTCCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCTGGGGGA 259 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||||||||| ||||||| ||| | | | | |||||| ||| || || Sbjct 258 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCGACC 199 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| || |||||||| || || ||||| ||||||||||| Sbjct 198 TCCAAGGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATTTGCAT 152 >seq3402 Length=1793 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| ||| |||||||| | || |||||||||||||| ||||| Sbjct 1415 CTCCTTTTGGATGTTGTAATCGCTGAGAGTGCGACCATCCTCGAGCTGCTTGCCCGCGAA 1474 Query 46462 TATCAAGCGCTGCTGGTCGG 46481 |||| ||||||||||||| Sbjct 1475 GATCAGTCGCTGCTGGTCGG 1494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565165279347480