Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq176 111 2e-19 seq1547 100 4e-16 seq1347 87.8 2e-12 >seq176 Length=24199 Score = 111 bits (122), Expect = 2e-19 Identities = 169/234 (72%), Gaps = 10/234 (4%) Strand=Plus/Plus Query 102085 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTA 102144 |||| ||||| || |||||| |||| |||| || || | ||||| || || |||||| Sbjct 19637 AGCATCTCTTCGACGCCATCGAAACGATTCCTTGCATCAAGAAGAAGGCTGACTGGGCTT 19696 Query 102145 TGAAGTGGTT-TGATACAA--AGTC-GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCG 102200 | ||| | | | |||| |||| |||||| || || |||||| | || ||||| Sbjct 19697 TACGCTGGATCTCAGACAAGAAGTCCGCGTTC----GCCGAACGACTCGTTGCCTTTGCT 19752 Query 102201 TGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCG 102259 ||||| || ||||||||||| || || || |||| | || | |||||||||||| | Sbjct 19753 GCGGTTGAAGGAATCTTCTTCTCGGGCTCGTT-TGCGTCCATCTTCTGGCTCAAGAAGAG 19811 Query 102260 AGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 |||||||||||| || | |||||||| || || ||| || |||||||| Sbjct 19812 AGGTCTCATGCCTGGCTTGACGTTCTCCAATGAACTGATCAGCCGCGACGAGGG 19865 >seq1547 Length=32498 Score = 100 bits (110), Expect = 4e-16 Identities = 219/322 (68%), Gaps = 11/322 (3%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 ||||| |||||||| | |||||||| | ||||| || || || ||||| | Sbjct 25948 AAACCGTCCATCTCCACAAGCAGCTGGTTGAGCGTTTGCTCGCGCTCGTCATTGCCCCCG 26007 Query 16035 ATACCACCA---GCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 | ||| | ||||| || | ||| || | |||||| || || || ||||||| |||| Sbjct 26008 AAACCGCTCTTCGCACTACGCTTCTTCCCGATGGCATCGATTTCGTCGATGAAGATGATG 26067 Query 16092 CATGGTTGATT-TTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 16150 || || || ||| | ||| | || |||||||| || ||| || || ||||| Sbjct 26068 CACGGCGCGTTCTTCTTGGCCGAAG-CGAACAGATCCCGCACTCGCGAGGAACCGACACC 26126 Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGAT--GAAGGGGACATTAGATTC 16207 |||||||||||| || || | || | || || ||| ||| || || || | ||| Sbjct 26127 AACAAACATCTCGACGAATTCTGAACCAGAGAC---GGAAAGGAAAGGTACGTTGGCTTC 26183 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267 ||| || | ||| || || | || ||||| ||||| || ||| | ||| | || Sbjct 26184 ACCTGCTGTCGCTTTCGCCAGCAAGGTTTTACCGGTACCGGGAGGACCAGAGAGAATAGC 26243 Query 16268 ACCTCGTGGAATCTTGGCGCCA 16289 |||||||||||||||||| ||| Sbjct 26244 ACCTCGTGGAATCTTGGCACCA 26265 >seq1347 Length=113524 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/228 (69%), Gaps = 11/228 (5%) Strand=Plus/Plus Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 || || || ||| | || | |||||| | || |||||||| | | | | || || || Sbjct 31785 GGAACCAACGGTTACTCGAACGGTATTGTGCCTATGCTTCGTGCGTATGATGCAACCGCT 31844 Query 111963 CGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAG 112016 || ||||| |||||| ||| ||||| | || | | || |||| |||||| Sbjct 31845 CGGTATGTCGACCAAGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTTGAG 31901 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 || |||||||| |||||| | ||||||||||| | ||| ||||| ||| | |||||| Sbjct 31902 CCTTGGCACGCTGATATCTTCGAGTTCCTTGACCTTCGTAAGAACCACGGTAAAGAGGAG 31961 Query 112077 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 112123 | | |||| ||||| || |||| ||| | ||| || | || || || Sbjct 31962 GTTC-GTGCTCGCGACCTGTTCTACGCATTATGGGTTTCCGACCTTTT 32008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620662099211280