Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2980 111 2e-19 seq176 86.0 7e-12 >seq2980 Length=15283 Score = 111 bits (122), Expect = 2e-19 Identities = 355/541 (66%), Gaps = 15/541 (3%) Strand=Plus/Minus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 ||||| || ||| || | ||||| |||||| | ||| ||||| | ||| |||||| Sbjct 14512 CCCTCGTCACGGCTGATCAACTCATTCGAGAAGGTCAAGCCAGGCATCAAACCACGCTTC 14453 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 ||||||||| | |||| ||| || |||||||||||||||||||| || || ||| Sbjct 14452 TTCAACCAAAAGATAGATGCGAAAGAGCCGGAGAAGAAGATACCCTCGACGGCGGCGAAC 14393 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AAACCATTTCATTGCCCAT 117468 || | ||| ||||||| ||| | ||| || |||| | ||| || ||||| Sbjct 14392 GCGACAAGACGCTCGGAGAATG---CAGAGTTCTTGTCCGAGATCCAGCGCAAGGCCCAG 14336 Query 117469 TTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCT-TCTTTTC 117527 | |||||||||| || || || | || | ||| || || || | |||| | || | Sbjct 14335 TCAGCCTTCTTCTTGATGCAAGGAATGGTCTCGATAGCATCGAAGAGGTGCTCGCGTTGC 14276 Query 117528 AGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT-TT 117586 | ||||| |||||| |||| || | || ||||| || ||| | | | Sbjct 14275 TTA-GGGTCCTTGATGTATGTGTCGATGAGAAGGGAGTATGTCTCTGAATGGATGTTCTC 14217 Query 117587 CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTC-GCTTATCTGCACTTCATCCGCA 117645 ||| || | ||| | ||||||| | || ||||| ||| | || || || | | Sbjct 14216 CATCAT-GATTTGGAAGCCGTAGAAGCAACGAGCTTCAGCTGCT-TGAACCTCGTTGGAG 14159 Query 117646 AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGATG 117705 || | || ||||| ||||| ||||| || |||||||||| || |||| | Sbjct 14158 AACCGCTCGACGAGGTTCTCGTTGACAATACCATCCGAGGCAGCAAAGAAGGCGAGGACG 14099 Query 117706 TACTTTATGAATTTCTTTTCATTTTCATTCAG---GGTCTTCCAGTCGTCAAGATCTTTG 117762 | ||||| | |||||| || || || | | | |||||||| || || || Sbjct 14098 TGTGAGATGAAGTGACGTTCATTGTCGTTGAGTCTGTTGTCCCAGTCGTGGAGGTCCTTC 14039 Query 117763 GACAAATCAACTTCTTCCGCAGTCCAATTGCTCATTTGAGCCTTTTTATAGAGTTCCCAG 117822 |||||||| | || || |||||||| | | || |||||| ||||| | || |||| Sbjct 14038 GACAAATCCATCTCCTCAGCAGTCCAGAAGGACGCTTCAGCCTTCTTATACATTTGCCAG 13979 Query 117823 A 117823 | Sbjct 13978 A 13978 >seq176 Length=24199 Score = 86.0 bits (94), Expect = 7e-12 Identities = 161/233 (69%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 ||||| || ||| || |||||||| ||||| | ||| ||||||||||| | |||| Sbjct 19865 CCCTCGTCGCGGCTGATCAGTTCATTGGAGAACGTCAAGCCAGGCATGAGACCTCTCTTC 19806 Query 117352 TTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 117410 || | ||| | || | |||| || || || ||||||||||| || || || ||||| Sbjct 19805 TTGAGCCAGAAGATGGACGCA-AACGAGCCCGAGAAGAAGATTCCTTCAACCGCAGCAAA 19747 Query 117411 CGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AAACCATTTCATTGCCCA 117467 |||| || || |||||||| | | ||||| |||| | ||| | ||||| Sbjct 19746 GGCAACGAGTCGTTCGGCGAACGCG---GACTTCTTGTCTGAGATCCAGCGTAAAGCCCA 19690 Query 117468 TTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCT 117520 | |||||||||| || || || | |||| |||||| || || | |||| Sbjct 19689 GTCAGCCTTCTTCTTGATGCAAGGAATCGTTTCGATGGCGTCGAAGAGATGCT 19637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589904478608760