Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1988 159 8e-34 seq105 152 1e-31 seq4155 102 2e-16 seq3402 89.7 1e-12 seq2768 89.7 1e-12 >seq1988 Length=7662 Score = 159 bits (176), Expect = 8e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||| || || ||||| || || ||||||||||| | || || | ||||| || | Sbjct 4577 CAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAA 4518 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 | |||||||| || ||||| || ||||||||||| ||||||||||| || |||||||||| Sbjct 4517 GTTGCTTACCGGCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAA 4458 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | ||| ||| || || || ||||| || ||| || || || ||||| | ||||| | Sbjct 4457 TCTTTGCCTTAACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGC 4398 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| || ||||| | ||||| Sbjct 4397 CGGTCAAAGTCTTCACGAAGATCTGCAT 4370 Score = 145 bits (160), Expect = 2e-29 Identities = 157/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| || || ||| ||| || || ||||||||||| | ||||| | |||||||||| Sbjct 3782 CAAGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGA 3723 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || |||||||| || || || ||||| || ||||| || || |||||||| | Sbjct 3722 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGA 3663 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | ||| ||||||||| |||||||| || || || || || || || | ||||| | Sbjct 3662 TCTTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGC 3603 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||| || |||||||| | ||||| Sbjct 3602 CAGTCAGGGTCTTTACGAAGATCTGCAT 3575 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| |||||||| ||| ||| || ||||| ||||| || | ||| || | ||||| || Sbjct 4069 AACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTC 4010 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || ||||| | ||||| ||||| ||||||||||| || ||||| || Sbjct 4009 GAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 3950 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || |||||| || || || ||||| || || ||||| ||||| | |||||| Sbjct 3949 GATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGACTTCGAGGGTGATCGTCTT 3890 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | ||||| Sbjct 3889 GCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 >seq105 Length=629 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || |||||||| | ||||| | ||||| ||| Sbjct 360 ACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTCCGGCCATCCTCG 301 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || |||||||| ||||| |||||||| || |||||||| Sbjct 300 AGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCTGGGGGAATGCCCTCCTTGTCTTGG 241 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || ||||| ||||| || || || || | ||| | |||||| Sbjct 240 ATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCGACCTCCAAGGTGATCGTCTTG 181 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | |||||| Sbjct 180 CCCGTGAGAGTCTTAACGAAGATTTGCAT 152 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||||||||| || ||| |||||||| ||||| |||| || || | |||||||||| Sbjct 587 CAAGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGA 528 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 | ||||| || |||||||| || ||||| ||||| || || || ||||| |||||||| | Sbjct 527 GTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGA 468 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 |||| ||| ||||| ||||| ||||| ||| || || || | |||| || || | Sbjct 467 TTTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCC 408 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| | || || || || | |||||| Sbjct 407 CTGTGAGCGTCTTGACAAAGATCTGCATT 379 >seq4155 Length=6849 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||||||||| ||||| ||||| || | || || || || || ||| Sbjct 94 ACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTCCTGCCGTCCTCG 153 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||| || |||||||| || ||||||||||| || ||||| Sbjct 154 AGCTGCTTTCCAGCGAAGATGAGACGTTGTTGGTCAGGCGGAAT 197 >seq3402 Length=1793 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| ||||| || ||||||||| ||||| | ||||| |||||||| Sbjct 1403 GTGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTGAGAGTGCGACCATCCTCGAGCTG 1462 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||| || |||||||| ||||| || ||||| || || || Sbjct 1463 CTTGCCCGCGAAGATCAGTCGCTGCTGGTCGGGGGGGAT 1501 >seq2768 Length=3315 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| || || |||||||| || | ||| || ||||| |||||||| Sbjct 2827 GTGAAGGGTAGACTCCTTCTGGATATTGTAGTCACTCAAAGTCCTGCCATCCTCGAGCTG 2886 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||| || |||||||| ||||||||||| || || ||||| Sbjct 2887 CTTGCCGGCGAAGATGAGTCGTTGTTGATCGGGCGGAAT 2925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109334486553683