Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq176 248 2e-60 seq2980 239 8e-58 seq1347 87.8 3e-12 >seq176 Length=24199 Score = 248 bits (274), Expect = 2e-60 Identities = 387/550 (70%), Gaps = 5/550 (1%) Strand=Plus/Minus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| || ||||| | |||| ||| ||||| |||||||| || | |||||||| | Sbjct 19887 GCACGCGAAGTCAGTATGCATGCCCTCGTCGCGGCTGATCAGTTCATTGGAGAACGTCAA 19828 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 |||||||||| || |||| ||||||||||| || | ||| || ||||| |||||||| Sbjct 19827 GCCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGACGCAAACGAGCCCGAGAAGAA 19768 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| || || || || || || || ||| | || |||| | | ||||||||||| Sbjct 19767 GATTCCTTCAACCGCAGCAAAGGCAACGAGTCGTTCGGCGAACGCGGACTTCTTGTCTGA 19708 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 ||||||| | |||||||| ||||||||||||||||| || ||||| || ||||| Sbjct 19707 GATCCAGCGTAAAGCCCAGTCAGCCTTCTTCTTGATGCAAGGAATCGTTTCGATGGCGTC 19648 Query 48370 GAAGAGCTTCTTGCACT-CACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428 |||||| | || | | ||| ||| | || ||| || || | ||| Sbjct 19647 GAAGAGATGCTCCCGTTGGGTCTG-GTCTTTGATGTACGTATCGATGAGGAGGGAATACG 19589 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||| ||||| || |||||| | ||||||| Sbjct 19588 TCTCGGAGTGAATGTTCTCCATCATGATTTGGAAGCCATAGAAGCAGCGGGCCTCAGCTG 19529 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 | || ||||| ||||||| | || | |||||||| ||||| || || || ||||| | Sbjct 19528 CTTGGACTTCGTTGGAGAACCGTTCAACGAGATTCTCGTTGACAATACCGTCCGAAGCCG 19469 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCC 48605 | ||||| ||||| ||||| | ||||||||||||||||| | | | | | || Sbjct 19468 CGAAGAAAGCAAGAACATGAGAGATGAAATGGCGCTCGTTGTCGTTCAACCGGTGTTGCC 19409 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | ||||| |||||||| |||||| | |||||||| ||||| |||| Sbjct 19408 AGTCGTGCATATCTTTCGACAGGTCCATCTCTTCCGCTGTCCAGAATGACGCTTCGGCTT 19349 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 19348 TCTTGTACAT 19339 >seq2980 Length=15283 Score = 239 bits (264), Expect = 8e-58 Identities = 389/557 (70%), Gaps = 5/557 (1%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||||| ||| |||||||| | |||| ||| ||||| |||||||| | | | || |||| Sbjct 14541 AGAGCAAGCAAGCAAAGTCGGTATGCATGCCCTCGTCACGGCTGATCAACTCATTCGAGA 14482 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || | |||||||| | || | || || | ||| || || | ||||||||||| | Sbjct 14481 AGGTCAAGCCAGGCATCAAACCACGCTTCTTCAACCAAAAGATAGATGCGAAAGAGCCGG 14422 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 |||||||||| ||||| || || ||||||||| || | ||| ||| | || ||||| Sbjct 14421 AGAAGAAGATACCCTCGACGGCGGCGAACGCGACAAGACGCTCGGAGAATGCAGAGTTCT 14362 Query 48303 TGTCTGAGATCCAG-GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCT 48361 |||| ||||||||| | ||| |||||||| ||||||||||||||||| || || ||||| Sbjct 14361 TGTCCGAGATCCAGCGCAAG-GCCCAGTCAGCCTTCTTCTTGATGCAAGGAATGGTCTCG 14303 Query 48362 ATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTT 48421 || || |||||| | || || | | |||| | || || || || Sbjct 14302 ATAGCATCGAAGAGGTGCTCGCGTTGCTTAGGGTCCTTGATGTATGTGTCGATGAGAAGG 14243 Query 48422 GCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCC 48481 | ||| |||| || || | ||||| || ||| ||||| ||||||||| | || Sbjct 14242 GAGTATGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCT 14183 Query 48482 TCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCT 48541 ||| | || || || ||||||| | ||| | || ||||| ||||| || ||||| Sbjct 14182 TCAGCTGCTTGAACCTCGTTGGAGAACCGCTCGACGAGGTTCTCGTTGACAATACCATCC 14123 Query 48542 GAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCA 48601 || |||||||||||||| ||||| ||| | ||| || || || |||| | |||| Sbjct 14122 GAGGCAGCAAAGAAGGCGAGGACGTGTGAGATGAAGTGACGTTCATTGTCGTTGAGTCTG 14063 Query 48602 TT---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCG 48658 || |||| | || | ||| || || |||| || || |||||||||||||||| Sbjct 14062 TTGTCCCAGTCGTGGAGGTCCTTCGACAAATCCATCTCCTCAGCAGTCCAGAAGGACGCT 14003 Query 48659 AGTGCTTTTTTGTACAT 48675 || || || ||||| Sbjct 14002 TCAGCCTTCTTATACAT 13986 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 47852 ACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAG 47911 |||| ||||| |||||||| ||||| |||| | |||||| | ||||||||| |||| Sbjct 14863 ACTCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATATCCATGAAGTCGAAG 14804 Query 47912 GGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCAGGTGATCCGCGA 47969 ||||||| | ||| |||||| | || | |||| ||| ||| | || |||| Sbjct 14803 GGGTTGGTTACGTTGTACACCTTGGGGTTA--CCCAAAGCAGCCAACAGACGGTCGGCGA 14746 Query 47970 CGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAG 48029 || |||| ||||||| ||||||| || |||||| || ||||||| || || | || Sbjct 14745 CGAACTCAATGTATTGGCACATGAGCTTGGAGTTCATACCAATGAGGGCAACAGGAAGAG 14686 Query 48030 C 48030 | Sbjct 14685 C 14685 >seq1347 Length=113524 Score = 87.8 bits (96), Expect = 3e-12 Identities = 195/290 (67%), Gaps = 2/290 (1%) Strand=Plus/Minus Query 213119 CCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGG 213178 ||||||||| |||| |||||||| |||| || || ||||| | ||| | ||| || Sbjct 32835 CCACATGTCGTACTGGAAGATGCCCCTGCTGACAGGACTGCCTTCGTACGTCTCGTAAGG 32776 Query 213179 GCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAA 213238 |||| | || ||| || || | | || | || ||||||| ||||| || || || Sbjct 32775 ACCATCCCTCTCGGCAAGATCACTGCTGGCGTCGAGAGCAGCGTGATAGATAGTCTCGAA 32716 Query 213239 TATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAA 213298 |||| | ||||||| | ||||| || || ||| |||| | | | ||| Sbjct 32715 GATCTGCTTGTTGAGGTGACGCGCCTCGGGAGAGTCGAACGGCAGCCGAAGGATCATGAA 32656 Query 213299 CACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGG 213357 | | ||||| || || | || |||||||| ||||| | ||| | || ||| || | | Sbjct 32655 CGCGTCAGCGAGACCGTTCACACCGATGCCAATGGGACGGTGGCGCATGTTGGAACGACG 32596 Query 213358 AGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTG 213407 ||| ||| | ||||| ||||| ||| ||||||||||| | |||| Sbjct 32595 AGC-CTCGGGAATTGGGTAGTAGTTGATGTCAATGATCTTGTTCAAGTTG 32547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931412294588160