Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq176 176 8e-39 seq2980 109 1e-18 seq1347 96.9 6e-15 >seq176 Length=24199 Score = 176 bits (194), Expect = 8e-39 Identities = 439/657 (67%), Gaps = 26/657 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||||||||| || || ||| |||||| || |||||||| || ||| Sbjct 19330 ATCTGGCAAATGTACAAGAAAGCCGAAGCGTCATTCTGGACAGCGGAAGAGATGGACCTG 19389 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTT----TC 25588 | || || ||| ||| |||| | || | | | | | |||||| ||||| || Sbjct 19390 TCGAAAGATATGCACGACTGGCAACACCGGTTGAACGACA-ACGAGCGCCATTTCATCTC 19448 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 ||| || | || | ||||| || || || || ||||| || ||||||||||| | Sbjct 19449 TCATGTTCTTGCT----TTCTTCGCGGCTTCGGACGGTATTGTCAACGAGAATCTCGTTG 19504 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 | | ||| ||| ||||| || | |||||| || ||||| || ||||| || Sbjct 19505 AACGGTTCTCCAACGAAGTCCAAGCAGCTGAGGCCCGCTGCTTCTATGGCTTCCAAATCA 19564 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGAC 25767 || || || | ||||| ||| |||| || || | ||| |||||||| | |||| Sbjct 19565 TGATGGAGAACATTCACTCCGAGACGTATTCCCTCCTCATCGAT-ACGTACATCAAAGAC 19623 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 || | | || | || || | |||||||| || || ||||||||| |||| Sbjct 19624 CAGACCCAACGGGAGCATCTCTTCGACGCCATCGAAACGATTCCTTGCATCAAGAAGAAG 19683 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGCGGCTGGT 25886 || ||||| | |||||| ||| || || | |||| | ||| || || || Sbjct 19684 GCTGACTGGGCTTTACGCTGGATCT-CAGACAAGAAGTCCGCGTTCGCCGAACGACTCGT 19742 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 ||||||||||| || || || ||||| ||| || ||||||||| ||||||||||||| Sbjct 19743 TGCCTTTGCTGCGGTTGAAGGAATCTTCTTCTCGGGCTCGTTTGCGTCCATCTTCTGGCT 19802 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 |||| ||| || |||||| || || || ||||| || || |||||| | ||||| Sbjct 19803 CAAGAAGAGAGGTCTCATGCCTGGCTTGACGTTCTCCAATGAACTGATCAGCCGCGACGA 19862 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC 26066 ||| | || | || || || ||||| || | | | ||| ||| | | | | Sbjct 19863 GGGCATGCATACTGACTTCGCGTGCCTCCTGTTCTC---TCAC---CTCAGAAGGCGTCC 19916 Query 26067 TCA---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 ||| || || ||| | || ||||||| ||||| || ||||| ||| ||||||| Sbjct 19917 TCACCCTGACACTGTCAAGAGGATCATCACTGAGGCCGTCGAGATTGAGCAGGAGTT 19973 >seq2980 Length=15283 Score = 109 bits (120), Expect = 1e-18 Identities = 368/566 (65%), Gaps = 9/566 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||| || ||||| | ||| |||||| ||||||||||| || || Sbjct 12519 ATTTGGCAAATGTATAAAAAGGCAGAGGCTTCATTCTGGACAGCCGAAGAGATCGACCTC 12460 Query 25537 GCCAAGGACATGGACGGCTGGTACGC---TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 | | || ||| | |||| || | ||| | | |||| | ||||| || | Sbjct 12459 TCGCACGATCTGGTAGACTGGCACACCCGTCTGAACGATAACGAACGTCATTTCATCTCG 12400 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || | ||| ||||| || || |||||||| || ||| || Sbjct 12399 CACGTACTCGCCTTCTTCGCTGGCTCCGATGGGATCGTCAACGAGAACCTCGTCGAACGA 12340 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| | | || |||||| | || || || |||||||| ||||| || || Sbjct 12339 TTCTCGAACGAGGTGCAGGCAGCTGAAGCTCGTTGCTTCTACGGCTTCCAAATCATGATG 12280 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCT-TCTGATGACGTACATTACAGACGTCGC 25772 || || | || || ||| ||| || || |||| || ||||| ||||||| Sbjct 12279 GAGAACATCCATTCAGAGACGTACTCCCTCCTCATTGAT-ACCTACATCCAAGACGTCAA 12221 Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832 || |||| | || | || |||||| || ||| | ||| ||| |||||| Sbjct 12220 GCAGCGAGAATACTTATTCGACGCTATCGAGACTATTCCCTGTATCCAGAAGAAGGCCGA 12161 Query 25833 GTGGGCCATGAAGTGGATCAACAG--CCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 |||||| | |||||| | ||| | | || ||||||| | || || || || ||| Sbjct 12160 GTGGGCTCTTCGGTGGAT-ATCAGATCAACAG-TCTACGTTCGCAGAACGTCTCGTCGCC 12103 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 ||||| || || || ||||| || || || | || ||||| || || ||| | || Sbjct 12102 TTTGCAGCGGTAGAAGGCATATTCTTTTCTGGCTGTTTCGCGGCGATTTTTTGGTTGAAA 12043 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 ||| ||| |||||| || ||| | || || ||||| ||||| || |||||||| Sbjct 12042 AAGAGGGGCCTCATGCCAGGACTGACGTACTCGAATGAGCTGATCAGTAGAGACGAGGGG 11983 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCT 26036 | || | |||||||| || |||| Sbjct 11982 TTGCATACTGATTTTGCTTGTTTGCT 11957 >seq1347 Length=113524 Score = 96.9 bits (106), Expect = 6e-15 Identities = 182/260 (70%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 221357 ACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGC 221416 || ||||| || ||||||| |||||| ||||| | | ||||| | | | | || Sbjct 32804 ACAGGACTGCCTTCGTACGTCTCGTAAGGACCATCCCTCTCGGCAAGATCACT-GCTGGC 32746 Query 221417 GTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGG 221475 ||| || |||||||| ||||| ||||| |||||| ||||||||| |||||||| Sbjct 32745 GTCGAGAGCAGCGTGATAGATAGTCTCGAAGATCTGCTTGTTGAGGTGACGCGCCTCGGG 32686 Query 221476 AGAAGTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534 ||| ||| |||| || || ||| |||| | |||| || || || | || ||||| | Sbjct 32685 AGAGTCGAACGGCAGCCGAAGGATCATGAACG-CGTCAGCGAGACCGTTCACACCGATGC 32627 Query 221535 CGATGGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAGTTGACG 221593 | ||||| | ||| | | |||||||| || | || || || | || || |||||| | Sbjct 32626 CAATGGGACGGTGGCGCATGTTGGAA-CGACGAGCCTCGGGAATTGGGTAGTAGTTGATG 32568 Query 221594 TCGATCAGATTGTTGAGGTT 221613 || || | ||||| | ||| Sbjct 32567 TCAATGATCTTGTTCAAGTT 32548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928724642314560