Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_019517.1 Length=136947 Score E Sequences producing significant alignments: (Bits) Value seq7972 223 3e-53 >seq7972 Length=7339 Score = 223 bits (246), Expect = 3e-53 Identities = 549/824 (67%), Gaps = 8/824 (1%) Strand=Plus/Minus Query 133143 TTGACTTCTCGATAGTTTCTTTTCTCTTTATCTTAGCACCACCGCCAATTGCAACGGATT 133202 |||| || | ||| ||||| ||| || ||| || |||||||| ||||| || | | Sbjct 7255 TTGATTTGTTGATGGTTTCCCTTCGTTTGATCGCTGCCCCACCGCCTATTGCGACCAACT 7196 Query 133203 GAAATACACGTTCTGCATTATCAATTGCAAATTGTGCTAATTCATCATCAAATGTATCAG 133262 | || || | || || |||||||| ||||| | |||| |||||||||||| ||| | Sbjct 7195 GGAAAACCCTGTCGGCGTTATCAATAGCAAACCGAGCTATTTCATCATCAAA-GTA-CTC 7138 Query 133263 GCAGTTTTT--TCTTGGCCTCTTTTGTATCTTTATAGCCATTGGCCTT-TGCAAACGCAT 133319 | || | ||||||| | || | | |||| | | || ||| |||| Sbjct 7137 CCCGTACTCCCTCTTGGCGGCCGCTGAGGAGTCAAAGCCGA-GACTTTCTGCGGTTGCAT 7079 Query 133320 CGGCAATACCGCACCACGTCCAACTTTTATAATGGTCATCCGGGTTTAATAGATATTTGT 133379 | || || || |||| |||| | ||||||||| ||| | |||| || || |||| Sbjct 7078 CTGCGATGCCCATCCACTTCCAGCAAGAATAATGGTCTTCCTGATTTATCAGGTACTTGT 7019 Query 133380 TATATCCCGTATCATATCCTTTAGGTATATAGATTTTGTTAAGCGGCTTCTTGGTACGAT 133439 ||||| | | |||||||| | ||||| | || || || | |||||| || | || Sbjct 7018 TATATGCAGGGTCATATCCCCTTGGTATCCATATCTTTTTGATTGGCTTCCTGCTCTTAT 6959 Query 133440 CTTTTGCATATACAAGCAAAAAGTTTGCTGTGGAGAAAACTGTAGTTCCTGTTGCCTTAA 133499 ||||| || | || | |||| || || || ||||| || | || || ||||| | Sbjct 6958 TCTTTGCGTAAATCAGTATGTAGTTAGCGGTAGAAAAAACGGTTGCCCCGGTAGCCTTGA 6899 Query 133500 AGCCCGAAGGACAGTTTGTGGTCATCGATATGGTATTTAACTGATTTGCA-CGACCAAAA 133558 |||| || || |||||||||| || || || || | | | |||| || ||||| Sbjct 6898 AGCCGGAGGGGTCATTTGTGGTCAGCGTGATCGTGTTGCAAT-AGTTGCTGCGCCCAAAC 6840 Query 133559 ATCTCGTCCATCAAAACTTTTAAATAAGCCATTTCGCAGTCATCTAAGTGAACAAATATT 133618 | ||| || | | ||| || |||| ||||| || | ||||| | ||||| | | Sbjct 6839 ACCTCATCAAGTAGAACCTTGCAATATGCCATCTCTGAATCATCGAGATGAACCGCCAAT 6780 Query 133619 ACTCCATCATCGCTTAGCAGATTACGAATTATTTCTAACCTGTCCCGCATTAAGCCCAGC 133678 || ||||| || | || || | || |||||| || | || ||||||| || ||| Sbjct 6779 ACCCCATCCTCTCCAAGGAGTCTTTTAAATATTTCAAAGCGATCTCGCATTAGTCCGAGC 6720 Query 133679 CAAATGGAGTGCTCCAGGCTATCATCGTAGTGCTCAAAATCCCTTCCGGTATTGAATGGC 133738 ||||| || ||||| | | ||||| || ||||| || | || || || || || ||| Sbjct 6719 CAAATCGAATGCTCGACACCGTCATCATAATGCTCGAACGCACTCCCCGTGTTAAACGGC 6660 Query 133739 GGGTCTATGTAAACACACTTCACTTTGCCTGCATACTCTTGCTCTAGTGCCTTCAATGCC 133798 ||||| || || | ||||| | | |||| | ||| || || | ||| ||||| ||| Sbjct 6659 GGGTCAATATAGATGCACTTAATCTCCCCTGAAAGCTCATGTTCCAATGCTTTCAACGCC 6600 Query 133799 AGTAAGTTATCGCCAAAAATCAGTTTATTATCAAAAATATCGTTTTCGGTCACCTTTTTA 133858 || ||||| || ||||||||||| || || || || ||||| || ||||| | Sbjct 6599 AGCAAGTTGTCACCAAAAATCAGCCGGTTGTCGAAGATGTCGTTGTCCGTCACGCGATGC 6540 Query 133859 CTGGCGTGATAAGACTTGCTCGTGTCTTCTAACAAAATGCACGGATCTAACTTTTTTCGC 133918 |||||||||| ||||| || ||||| | || |||| ||| || | ||| ||| Sbjct 6539 TTGGCGTGATACGACTTTTCCGGATCTTCCAGCAGGATGCGCGGCTCCAGCTTGGGCCGC 6480 Query 133919 TCGTTTTTGCCTGTCCAGGTAAGCTCTAATTTGGTTTTGCTCAT 133962 | | ||||| |||| || || || | ||| |||||||| Sbjct 6479 TTCTCCTTGCCGATCCAAGTCAGTTCAAGTTTTTGCTTGCTCAT 6436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438045725978280