Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq105 122 6e-22 seq1988 111 1e-18 >seq105 Length=629 Score = 122 bits (134), Expect = 6e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || || || ||||| ||| || || | || ||||||| ||||| Sbjct 372 CGAAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTC 313 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||| || || ||||||||||| || || |||||||||||||| || ||||| || Sbjct 312 CGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCTGGGGGAATGCCC 253 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 ||||||||||| ||||| || ||| |||||||| || | | | | | ||| Sbjct 252 TCCTTGTCTTGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCGACCTCCAA- 194 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || ||||||||||||||||| ||||| Sbjct 193 GGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATTTG 155 >seq1988 Length=7662 Score = 111 bits (122), Expect = 1e-18 Identities = 133/178 (75%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| ||||| | || || | | ||| ||||||||||| || ||||| || |||||||| Sbjct 4549 ATTGTAATCCGACAGGGTGCGGCCATCCTCAAGTTGCTTACCGGCAAAGATGAGACGTTG 4490 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||| ||||||||||| || |||||||||||||||||| || ||| || || ||||| Sbjct 4489 TTGGTCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTGCCTTAACATTGTCGATGGTATC 4430 Query 480713 AG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | | | || ||||| || || || ||||| | |||||| ||||| || || Sbjct 4429 AGAAGACTCGA-CCTCCAGGGTGATGGTCTTGCCGGTCAAAGTCTTCACGAAGATCTG 4373 Score = 98.7 bits (108), Expect = 6e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || || ||||| || || || || || || || |||| || || Sbjct 4081 ACGCAGACGAAGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGGGT 4022 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || || |||||||||||||| || | |||||| || ||||||||||| || Sbjct 4021 GCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGAATGCC 3962 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||| || ||||| |||||| || || || |||| | ||| || Sbjct 3961 CTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGACTTCGAG 3902 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || || | ||||| ||||| || || Sbjct 3901 GGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTG 3863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267735281176652