Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_020489.1 Length=40489 Score E Sequences producing significant alignments: (Bits) Value seq10074 100 7e-17 seq8418 82.4 2e-11 >seq10074 Length=976 Score = 100 bits (110), Expect = 7e-17 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 25833 CTCGATCACGTAATCATCGGAGAAGCCTTGCGCGCGGAACAGCTCGCGCGGGGTCAGCAT 25892 ||||||| ||| || | | |||||| |||||| |||||||||||||||||| ||||| Sbjct 504 CTCGATCTGGTATTCTGCCGGGAAGCCCTGCGCGTTGAACAGCTCGCGCGGGGTGAGCAT 563 Query 25893 CCGCATGCCGATATCGACCACGACGAATTTGGCGCCGTCGATC 25935 |||||||||||||||||| | ||| ||| |||| |||||| Sbjct 564 CCGCATGCCGATATCGACGATGACATATTCTTCGCCCTCGATC 606 >seq8418 Length=648 Score = 82.4 bits (90), Expect = 2e-11 Identities = 130/184 (71%), Gaps = 17/184 (9%) Strand=Plus/Plus Query 27124 CCGTCCTCGCCCACCGGCCCCCAGGTCGTGAACTCCTCGACGTTTTCGAGAAGGATCACG 27183 || || |||| | ||| |||||||| ||| ||||| ||||| || || ||||||| | Sbjct 1 CCTTCATCGCAGAGCGGGCCCCAGGTGCGGAATTCCTCCACGTTCTCCAGCAGGATCAGG 60 Query 27184 TCAGGGCGCTGCGCGCGGGGCAGATCCGCCCAGCGGATCACCACCCACGCGAGATCGCGG 27243 | || ||| ||||| ||| ||| ||| ||| ||||| ||||||||||| Sbjct 61 TTTGGCCGCA-CGCGCTTGGC--------CCACAGGACCACGACCCATGCGAGATCGCGA 111 Query 27244 ATA----TTGCGGTCGCGGACGCTTGCGCCCTTCGCCTTCGAGAAATGCTTGCAGTCCGG 27299 || || || ||||| || ||||||| ||||| ||| |||||||||||||| Sbjct 112 ATGGACTTTTCG--CGCGGCT--TTCCGCCCTTGGCCTTGCTGAAGTGCTTGCAGTCCGG 167 Query 27300 CGAG 27303 |||| Sbjct 168 CGAG 171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129427292158838