Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq8881 102 3e-17 >seq8881 Length=1866 Score = 102 bits (112), Expect = 3e-17 Identities = 208/303 (69%), Gaps = 12/303 (4%) Strand=Plus/Plus Query 39361 ACTCGGCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCG 39420 |||| || | ||||||| ||| |||||| | ||| |||| || | || || || | Sbjct 778 ACTCCGCCGTGTAGTGCACCTTGAGCCACCCGGTGTGGTAGGCCAGCAGCGAATAGGCGG 837 Query 39421 CCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACACTGCCT 39480 | | ||||| |||||||||| |||| || || ||| ||| || ||| | || || Sbjct 838 CGGCGTGCGACTTGTTGAAGCCGTAACCCGCAAACTTTTCCATCAGGTCGAAGAC---CT 894 Query 39481 GGATGGCACCGTCC-GAGT---AGCCTCGCTCGCGCGCTCCCTTCTGGAAGTT--CACGA 39534 | ||| |||| || | | ||| ||| || ||||| ||||| | |||| Sbjct 895 CGTCGGCCTTGTCCTGACTGATACCCTTT-TCGGCTGCACCCTTGCGGAAGATGGCACGG 953 Query 39535 ACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCT 39594 | || ||||| |||||| ||| ||||||||||| || ||||| |||| |||||| Sbjct 954 --TGCTCGGCCATTTCCTCGGCCTTTTTCTTGCCCATGGCGCGGCGCAGCATGTCGGCGC 1011 Query 39595 GACCGAGGGTGTACCCGGCCATGACCTGCGCAACCTTCTGCACCTGCTCCTGGTAGATGA 39654 ||||| | ||| || ||| |||||||| || | ||||||||||||||||| | Sbjct 1012 CGCCGAGCGAGTAACCACCCAGCACCTGCGCCGTCTGCATCACCTGCTCCTGGTAGACCA 1071 Query 39655 TGA 39657 ||| Sbjct 1072 TGA 1074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163864659479932