Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq904 136 1e-26 seq750 96.9 1e-14 seq6883 95.1 4e-14 seq6882 93.3 1e-13 >seq904 Length=24622 Score = 136 bits (150), Expect = 1e-26 Identities = 199/278 (72%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 302568 AATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTAC 302627 ||||||||||| | ||||| | |||||||| ||||| ||||| | ||| || || Sbjct 11783 AATGTCTTCCAAAGCCTTGACCAGTCGACGCTGGATATACCCAGTCTCGGCTGTCTTGAC 11724 Query 302628 AGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687 ||| ||||| || | ||| |||| ||| |||| ||||||||||| | ||||| ||| Sbjct 11723 AGCGGTATCGATCAAACCTTCACGTCCAGCCATGGCATGGAAGAAGAACTCTTGCGGGGT 11664 Query 302688 TAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC-GGGC-GAATCGTCGAAC 302745 || || | | ||||| |||| ||||| || |||||||| |||| ||| |||| | Sbjct 11663 CAGTCCACGGAGGTAGGAGTTCTCGACGAACCCGCGCGCCTCAGGGCTGAA--GTCGTCC 11606 Query 302746 TTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACG 302805 || || ||||| || || || | | ||||| |||| ||||||||||| ||||| Sbjct 11605 TTTGTGAAGTGGGGAAGCGTTCGATGACGGAAGCCGAATGGTATACGCTTTCCTTCAACA 11546 Query 302806 TTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||||||| || | ||| | ||| || || ||||| Sbjct 11545 ATCTGCTGCCCGACGCAGACAGACATTTGAGAGATATT 11508 >seq750 Length=2847 Score = 96.9 bits (106), Expect = 1e-14 Identities = 112/148 (76%), Gaps = 6/148 (4%) Strand=Plus/Minus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||||||||||||| ||||| || || || |||||||||| ||||| | | || | Sbjct 2615 CGATAGTCATACGAGATGGAATGGCGTGAGGGTTGATGATGAGATCGGGAGTGATACCTT 2556 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTTTGTC 251959 |||| ||||| ||||||||| |||| | ||| || | ||||| || ||||| || | Sbjct 2555 CAGCCGTGAAAGGCATATCC---TCCTGACGGTAAGTGATACCAATGGTACCCTTCTGAC 2499 Query 251960 CGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||| ||| |||||| || ||||| Sbjct 2498 CGTGACGCGAAGCGAACTTGTCGCCAAT 2471 >seq6883 Length=1785 Score = 95.1 bits (104), Expect = 4e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 251486 CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAG 251545 |||| || ||||||||||||||||||||||| || |||||||| ||||||||||| ||| Sbjct 1638 CACCATGCGAAATCATACAATCACGCTCCATCTCTCCGAAACGCAGACCACCATCACGAC 1697 Query 251546 CCCTACCCTCGGCAGGCTGACGAGT 251570 | ||||||| |||| ||||| || Sbjct 1698 TACGACCCTCGACAGGTTGACGCGT 1722 >seq6882 Length=1787 Score = 93.3 bits (102), Expect = 1e-13 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 251417 ACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGA 251476 || ||| || ||||| | ||||| |||||| || ||| | || || |||| || Sbjct 1571 ACATATCGCAGACATGCAATCTGTAGGCATCACTAGCCTCAAACAGACGTTCCTTCAAGA 1630 Query 251477 AGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCAC 251536 | | ||||||| ||||||||||||||||||||||| || ||||| || ||||||| Sbjct 1631 ACGCTGCCACACCGTGCGAAATCATACAATCACGCTCCATCTCTCCGAACCGCAGACCAC 1690 Query 251537 CATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 |||| ||| | |||||| |||| ||||| || Sbjct 1691 CATCACGACTACGACCCTCCACAGGTTGACGCGT 1724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471622442045613