Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq176 143 3e-28 seq7560 118 1e-20 seq2980 116 5e-20 seq3024 89.7 6e-12 seq8211 87.8 2e-11 seq1347 86.0 8e-11 >seq176 Length=24199 Score = 143 bits (158), Expect = 3e-28 Identities = 214/299 (72%), Gaps = 11/299 (4%) Strand=Plus/Minus Query 869169 CACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGA 869228 || ||||| || |||||||| ||||||| ||| ||| || | | ||| ||||||| Sbjct 19876 CAGTATGCATGCCCTCGTCGCGGCTGATCAGTTCATTGGAGAACGTCAAGCCAGGCATGA 19817 Query 869229 GGCCGCGCTTCTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCG 869287 | || | |||||||||||| ||||||| |||| || ||||||||| ||||| || || Sbjct 19816 GACCTCTCTTCTTGAGCCAGAAGATGGACGCA-AACGAGCCCGAGAAGAAGATTCCTTCA 19758 Query 869288 ACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATC 869344 || || |||||| | | ||| || ||||| || || || || ||||| |||| Sbjct 19757 ACCGCAGCAAAGGCAACGAGTCGTTCGGCGAA-----CGCGG-ACTTCTTGTCTGAGATC 19704 Query 869345 CACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAG 869404 || | |||||||| ||||| ||| | | | || | ||| ||||||||| ||| Sbjct 19703 CAGCGTAAAGCCCAGTCAGCCTTCTTCTTGATGCAAGGAATCGTTTCGATGGCGTCGAAG 19644 Query 869405 AGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || || ||| || || | |||| |||| || || ||||| ||||| ||||| ||||| Sbjct 19643 AGATGCTCCCGTTGGGTCTGGTCTTTGATGTACGTATCGATGAGGAGGGAATACGTCTC 19585 >seq7560 Length=1463 Score = 118 bits (130), Expect = 1e-20 Identities = 202/283 (71%), Gaps = 9/283 (3%) Strand=Plus/Minus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCG-ACGCCATCTCGCGGTG 1726791 |||||||||||||||||||||||||||| || | | ||||| | |||| |||||||| Sbjct 277 CCGTCGGTGCCGTTCTTGAAGCCGATGGGG-GCCGAAATGCCGGAGGCCAGTTCGCGGTG 219 Query 1726792 CACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA 1726851 |||||||| ||||| ||||||||||| | ||||||||| | |||||| | | || Sbjct 218 GACCTGGCTTTCGGTGGTGCGCGCGCCGATGGCGCCCCAACTGATCAGGTCGCCGATGTA 159 Query 1726852 -AGGGGCCACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACG- 1726909 ||||| | | | | || |||||| | || | ||| | | | | || | Sbjct 158 CTGGGGCGAAATCACGTC-CAGGAACTCGCTGCCCGCCGGCACGCCCAGGCGGTTGATGT 100 Query 1726910 AGATCGCGCAACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCG 1726969 ||| | ||| | ||| |||||| || |||||| ||| | | |||| | ||||| Sbjct 99 CGAT-GAGCAGCTGGC-GCGCGATGC--GCAGGCCCTCGTCGATGCGGTAGCTGCCGTCC 44 Query 1726970 AGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGC 1727012 |||| ||||||| || |||||||||||| || ||||| |||| Sbjct 43 AGGTAGGGGTCGTTGATCAGGCCCTTCCAGCCCACGGTGGTGC 1 >seq2980 Length=15283 Score = 116 bits (128), Expect = 5e-20 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 ||| | ||| ||||| || || || |||| ||| ||||||||||||||||| | | Sbjct 11593 GACATTCGCTTTGGCATATTCTGAGACACGCCTCTCAAAAAAGTTGGTCTTGCCTTGCAA 11652 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803 ||||||| ||||| | ||| ||||| | | ||||||| ||| |||||| Sbjct 11653 TGAGATCATATCCATGAAGTCGAATGGGTTCGCGGAGTTGTAGTACTTGGGATTTCCGAG 11712 Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863 || |||| ||||||||||| || |||||||| ||||| | |||||| | |||||||| Sbjct 11713 GGAGACGAGGAGGCGGTCGGCAACGAACTCGATATACTGACGCATGAGTGCTGCGTTCAT 11772 Query 868864 GCCGATGAG 868872 ||| ||||| Sbjct 11773 GCCTATGAG 11781 Score = 107 bits (118), Expect = 2e-17 Identities = 202/295 (68%), Gaps = 9/295 (3%) Strand=Plus/Minus Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231 ||||| || ||||| || ||||||| || || |||| | ||| ||||| | | Sbjct 14520 TATGCATGCCCTCGTCACGGCTGATCAACTCATTCGAGAAGGTCAAGCCAGGCATCAAAC 14461 Query 869232 CGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291 | |||||||| | ||||||||| | |||| ||| ||||| ||||| |||||||||| Sbjct 14460 CACGCTTCTTCAACCAAAAGATAGATGCGAAAGAGCCGGAGAAGAAGATACCCTCGACGG 14401 Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACT 869348 |||| || ||| || ||||||| || || ||| | ||||| |||||| Sbjct 14400 CGGCGAACGCGACAAGACGCTCGGAGAA--TGCAGAG----TTCTTGTCCGAGATCCAGC 14347 Query 869349 TCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT 869408 || |||||||| ||||| ||| | | | || | || ||||| || ||||||| Sbjct 14346 GCAAGGCCCAGTCAGCCTTCTTCTTGATGCAAGGAATGGTCTCGATAGCATCGAAGAGGT 14287 Query 869409 GGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | || || |||||||||| || |||||||| || || || || ||||| Sbjct 14286 GCTCGCGTTGCTTAGGGTCCTTGATGTATGTGTCGATGAGAAGGGAGTATGTCTC 14232 Score = 102 bits (112), Expect = 1e-15 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| | ||| || || ||| |||||| |||||||||||||||| |||||||||| Sbjct 14881 GCCTTCGAGTAATCCGATACTCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATC 14822 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||| | ||| ||||||| ||||| ||| | || | | || Sbjct 14821 ATATCCATGAAGTCGAAGGGGTTGGTTACGTTGTACACCTTGGGGTTACCCAAAGCAGCC 14762 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | ||| ||||||||||| ||||| ||||| ||||||||||| || |||||| || ||| Sbjct 14761 AACAGACGGTCGGCGACGAACTCAATGTATTGGCACATGAGCTTGGAGTTCATACCAATG 14702 Query 868871 AGCGCCACCGGCAG 868884 || || || || || Sbjct 14701 AGGGCAACAGGAAG 14688 Score = 95.1 bits (104), Expect = 1e-13 Identities = 174/252 (69%), Gaps = 5/252 (2%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 || ||||||||||| || ||| ||||||||||| ||| | | || || | || Sbjct 12266 GAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCTTCAGCTGCCTGC 12325 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| ||| ||| || || | ||||||||| ||||| || ||| | | ||||| Sbjct 12326 ACCTCGTTCGAGAATCGTTCGACGAGGTTCTCGTTGACGATCCCATCGGAGCCAGCGAAG 12385 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA---GCGACACCCAGTGG 869809 || || || |||||| ||| || || || |||| ||| | | | | ||||| Sbjct 12386 AAGGCGAGTACGTGCGAGATGAAATGACGTTCGTTATCGTTCAGACGGGTGTGCCAGTCT 12445 Query 869810 ACGGTGTCG-GCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 || ||| ||| |||||| | ||| ||||| ||||||| || ||||| |||||||| Sbjct 12446 ACCAGATCGTGCG-AGAGGTCGATCTCTTCGGCTGTCCAGAATGAAGCCTCTGCCTTTTT 12504 Query 869869 GTACATCTCCCA 869880 ||||| | ||| Sbjct 12505 ATACATTTGCCA 12516 >seq3024 Length=11410 Score = 89.7 bits (98), Expect = 6e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTG 19111 ||||||||| || | || ||||| |||||||| || | || |||||||| || Sbjct 8458 CATCGGCGGAACCATCACCTGCGTCATCCGCAACGTCCCCTCCGGACTCGGCGAACCCGT 8399 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 ||||||||| |||| ||| || || ||||||||||| || ||||| |||||||| | Sbjct 8398 CTTTGACAAATTCGAAGCCAAACTGGCACACGCCATGCTCTCCATCCCTGCCACCAAAGC 8339 Query 19172 ATTCGAGATTGG 19183 |||||||| || Sbjct 8338 GTTCGAGATCGG 8327 >seq8211 Length=2943 Score = 87.8 bits (96), Expect = 2e-11 Identities = 139/197 (71%), Gaps = 7/197 (4%) Strand=Plus/Plus Query 1632416 GGCTGTCTGATCGGGTGGGCGCGCCAGGGCGTGCTTCTGCTCAACACGTGCCTCACGGTC 1632475 ||| | ||| || ||||||| | |||||||| ||||||||||| ||||| ||||| Sbjct 2019 GGCAGCCTGGTCAAGTGGGCGAAGAACGGCGTGCTGCTGCTCAACACCTGCCTGACGGTG 2078 Query 1632476 GAGGCCGGACATCCGGGGTCGCACCGCGACCGCGGCTGGGAGCCCTTTACCGACGCGGTG 1632535 || | || || || | || || | |||||||||| | |||||||||||| Sbjct 2079 GAAGAGGGCCAGCCCGCCAGCCATTCCGGCAAGGGCTGGGAGCTGCTGACCGACGCGGTG 2138 Query 1632536 ATCTCGCTCGT-GAGC-AGGCGCTCGACGCACCCGGTGGTCTTTATGCTCTGGGGCCGCG 1632593 ||| | ||| | || ||||| || ||||||||| || ||||||||||| || Sbjct 2139 ATCCGCCACGTCGCGCAAGGCGGCCG-----CCCGGTGGTGTTCATGCTCTGGGGTAGCC 2193 Query 1632594 ACGCCCAGAGCAAGCGC 1632610 |||| ||| ||||||| Sbjct 2194 ACGCGCAGTCCAAGCGC 2210 >seq1347 Length=113524 Score = 86.0 bits (94), Expect = 8e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 1628466 CCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAG 1628525 ||| | |||||| || |||||||| || || |||||| || ||||||||||| || Sbjct 31994 CCATAATGCGTAGAACAGGTCGCGAGCACGAACCTCCTCTTTACCGTGGTTCTTACGAAG 31935 Query 1628526 GTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTT 1628585 ||| || | |||| || || |||||||| ||||| |||||| ||||||||| || Sbjct 31934 GTCAAGGAACTCGAAGATATCAGCGTGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGG 31875 Query 1628586 GCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 31874 ACGCTTGTTGCCACC 31860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106289912595633