Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq105 118 1e-21 seq1988 113 4e-20 seq1347 93.3 4e-14 >seq105 Length=629 Score = 118 bits (130), Expect = 1e-21 Identities = 145/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| || || ||||| |||||| | || || || | || Sbjct 380 ATGCAGATCTTTGTCAAGACGCTCACAGGGAAAACCATTACGTTGGAGGTCGAGTCTTCC 439 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||||||||| |||||||| || ||||| || Sbjct 440 GACACGATTGACAACGTGAAGGCGAAA-ATCCAAGACAAGGAAGGAATCCCACCCGACCA 498 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATA 24881 |||||| ||||||| || || || || || || || | || ||| | || || || | Sbjct 499 GCAACGTCTGATCTTCGCTGGCAAGCAACTCGAAGA-TGGACGTACACTCTCCGACTACA 557 Query 24882 ACATTCAAAAGGA 24894 ||||||||||||| Sbjct 558 ACATTCAAAAGGA 570 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || || || || || || || || | || || || | || Sbjct 152 ATGCAAATCTTCGTTAAGACTCTCACGGGCAAGACGATCACCTTGGAGGTCGAGTCGTCC 211 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || || || |||||| Sbjct 212 GACACTATTGACAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCAGATCAA 271 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || || || ||||| |||||| | | | || ||||| ||| Sbjct 272 CAACGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACTCTCTCTGATTACAAC 331 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || ||| | || | || | || ||||| Sbjct 332 ATCCAGAAGGAGTCTACCCTTCACCTCGTCCTTCGTCTTCGAGGAGG 378 >seq1988 Length=7662 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | || || || || || || |||||||| || || | Sbjct 3860 ATGCAGATCTTCGTCAAGACGTTGACGGGCAAGACGATCACCCTCGAAGTCGAGTCCTCT 3919 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 3920 GACACGATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 3979 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||||||||| || || ||||| |||||| | | | | || || || ||| Sbjct 3980 CAACGTTTGATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGACTACAAC 4039 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || ||| | || | || |||| ||||| Sbjct 4040 ATTCAGAAGGAGAGCACCCTTCACCTCGTTCTTCGTCTGCGTGGAGG 4086 Score = 100 bits (110), Expect = 3e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | ||||| || || || || || || || || | | Sbjct 4370 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAGACCATCACCCTGGAGGTCGAGTCTTCT 4429 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||| |||||||| || || || ||||| || ||| Sbjct 4430 GATACCATCGACAATGTTAAGGCAAAGATTCAAGACAAGGAGGGCATTCCTCCTGACCAA 4489 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||||||||| || || || |||||| | | | |||| ||||| || Sbjct 4490 CAACGTCTCATCTTTGCCGGTAAGCAACTTGAGGATGGCCGCACCCTGTCGGATTACAAT 4549 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGT 24912 || || ||||| || || || || |||||| Sbjct 4550 ATCCAGAAGGAGTCTACCCTCCACCTTGGT 4579 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || |||||||| || || || || Sbjct 3575 ATGCAGATCTTCGTAAAGACCCTGACTGGCAAGACCATCACGCTCGAGGTCGAGTCCTCC 3634 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||||||| || || || || ||||| || Sbjct 3635 GATACCATTGACAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATTCCACCCGACCAG 3694 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || ||| | ||||| ||||| || ||||| || ||| Sbjct 3695 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGAT 3730 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | ||||| || || || || || || || || | | Sbjct 4088 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCGTCT 4147 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| || || || || || || || Sbjct 4148 GACACGATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCGCCAGACCAG 4207 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| |||||| | | | | || ||||| ||| Sbjct 4208 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTCTCCGATTACAAC 4267 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGT 24912 || || ||||| || ||||| |||||| Sbjct 4268 ATCCAGAAGGAGAGTACCCTACACCTTGGT 4297 >seq1347 Length=113524 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138702 CCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATAC 138761 |||||| |||||||| || || ||| || | |||||||||||||||| ||||| Sbjct 32835 CCACATGTCGTACTGGAAGATGCCCCTGCTGACAGGACTGCCTTCGTACGTCTCGTAAGG 32776 Query 138762 ACCA-AACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGG 138820 |||| |||| | || | || |||| || ||||| ||| | | || ||||| ||| Sbjct 32775 ACCATCCCTCTCG-GCAAGATCACTGCTGGCGTCGAGAGCAGCGTGATAGATAGTCTCGA 32717 Query 138821 CAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGA 138880 ||||||| ||||| || ||||||| ||| |||||| || || ||| ||| Sbjct 32716 AGATCTGCTTGTTGAGGTGACGCGCCTCGGGAGAGTCGAACGGCAGCCGAAGGATCATGA 32657 Query 138881 ACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCA 138928 ||||||| || || || | ||| || | || | || || ||||||| Sbjct 32656 ACGCGTCAGCGAGACCGTTCACACCGATGCCAATGGGACGGTGGCGCA 32609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449839400121720