Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq176 167 4e-35 seq2980 145 1e-28 seq7560 95.1 2e-13 >seq176 Length=24199 Score = 167 bits (184), Expect = 4e-35 Identities = 237/330 (72%), Gaps = 9/330 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||||||| ||| ||| || | ||| |||||||| || | |||| Sbjct 19865 CCCTCGTCGCGGCTGATCAGTTCATTGGAGAACGTCAAGCCAGGCATGAGACCTCTCTTC 19806 Query 794401 TTGAGCCAAAAGATGGCACAGAAACT-GCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 |||||||| ||||||| || |||| ||||||||| ||||| || || || || ||||| Sbjct 19805 TTGAGCCAGAAGATGG-ACGCAAACGAGCCCGAGAAGAAGATTCCTTCAACCGCAGCAAA 19747 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGA--TCCACTTCATCGCC 794517 | | ||||| || ||||| || | | | | |||| ||| |||| | ||| Sbjct 19746 GGCAACGAGTCGTTCGGCGAACGCG-----GACTTCTTGTCTGAGATCCAGCGTAAAGCC 19692 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 || || ||||| ||| | | | || | ||| ||||||||| ||||| || ||| Sbjct 19691 CAGTCAGCCTTCTTCTTGATGCAAGGAATCGTTTCGATGGCGTCGAAGAGATGCTCCCGT 19632 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 | | | |||| |||| ||| || ||||||||||| || || ||||| ||||| ||||| Sbjct 19631 TGGGTCTGGTCTTTGATGTACGTATCGATGAGGAGGGAATACGTCTCGGAGTGAATGTTC 19572 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 || || ||| ||||||||||| |||||| Sbjct 19571 TCCATCATGATTTGGAAGCCATAGAAGCAG 19542 >seq2980 Length=15283 Score = 145 bits (160), Expect = 1e-28 Identities = 229/326 (70%), Gaps = 3/326 (1%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || |||||||| || || ||| | ||| ||||| | || |||||| Sbjct 14512 CCCTCGTCACGGCTGATCAACTCATTCGAGAAGGTCAAGCCAGGCATCAAACCACGCTTC 14453 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || | ||||||||| | |||| ||| ||||| ||||| |||||||||||||| || Sbjct 14452 TTCAACCAAAAGATAGATGCGAAAGAGCCGGAGAAGAAGATACCCTCGACGGCGGCGAAC 14393 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 |||| || ||||||| | | || || | | | | |||||| || ||||| Sbjct 14392 GCGACAAGACGCTCGG--AGAATGCAGAGTTCTTGTCCG-AGATCCAGCGCAAGGCCCAG 14336 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| ||| | | | || | || ||||| || |||||||| || | Sbjct 14335 TCAGCCTTCTTCTTGATGCAAGGAATGGTCTCGATAGCATCGAAGAGGTGCTCGCGTTGC 14276 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 |||||||||| ||| ||||||||||| || ||||| |||||||| |||||||| || Sbjct 14275 TTAGGGTCCTTGATGTATGTGTCGATGAGAAGGGAGTATGTCTCTGAATGGATGTTCTCC 14216 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCA 794666 || ||| |||||||| || ||||| Sbjct 14215 ATCATGATTTGGAAGCCGTAGAAGCA 14190 Score = 122 bits (134), Expect = 1e-21 Identities = 205/293 (70%), Gaps = 9/293 (3%) Strand=Plus/Plus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 || || ||||||||||| | ||| || | |||||| || || ||||| ||| || || Sbjct 12020 AGTCCTGGCATGAGGCCCCTCTTTTTCAACCAAAAAATCGCCGCGAAACAGCCAGAAAAG 12079 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 || ||||| || || || |||||| ||||||| || || || || || | | || Sbjct 12080 AATATGCCTTCTACCGCTGCAAAGGCGACGAGACGTTCTGCGAACGTAGACTGTTGATC- 12138 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556 || | |||||| | |||||||| ||||| ||| | |||| | || ||||| Sbjct 12139 -TGAT-ATCCACCGAAGAGCCCACTCGGCCTTCTTCTGGATACAGGGAATAGTCTCGATA 12196 Query 794557 GCGCGAAAGAGGTGGTC---CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGC 794613 ||| || | || || || || ||| ||| | || |||||| || |||||||| Sbjct 12197 GCGTCGAATAAGTATTCTCGCTGCTTGAC---GTCTTGGATGTAGGTATCAATGAGGAGG 12253 Query 794614 GAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 ||||| |||||||| |||||||| || || ||| |||||||| || ||||| Sbjct 12254 GAGTACGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCA 12306 Score = 109 bits (120), Expect = 9e-18 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 793898 CGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 793957 ||| |||||||| || || |||| ||| ||||||||||||||||| | | ||||| Sbjct 11599 CGCTTTGGCATATTCTGAGACACGCCTCTCAAAAAAGTTGGTCTTGCCTTGCAATGAGAT 11658 Query 793958 CAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGC 794017 || ||||| | ||| ||||| || | ||||| ||| ||||| || | Sbjct 11659 CATATCCATGAAGTCGAATGGGTTCGCGGAGTTGTAGTACTTGGGATTTCCGAGGGAGAC 11718 Query 794018 AAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGAT 794077 || ||||||||||| ||||| || || ||||| | |||||| || ||||||||||| || Sbjct 11719 GAGGAGGCGGTCGGCAACGAACTCGATATACTGACGCATGAGTGCTGCGTTCATGCCTAT 11778 Query 794078 GAGCGCCACGGGCAG 794092 ||| | ||||| || Sbjct 11779 GAGGCCTACGGGTAG 11793 Score = 104 bits (114), Expect = 4e-16 Identities = 148/206 (72%), Gaps = 8/206 (4%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| | || || || ||| |||||| |||||||||||||||| || Sbjct 14889 TGACACCAGCCTTCGAGTAATCCGATACTCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGA 14830 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGC----AC 794006 ||||||||| ||||| | ||| ||||||| | | || || | || | || Sbjct 14829 GCGAGATCATATCCATGAAGTCGAAGGGGTTGG---TTACGTTGTACACCTTGGGGTTAC 14773 Query 794007 CCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCG 794066 || | | ||| ||| |||||||||||||| |||||||| ||||||||||| || | Sbjct 14772 CCAAAGCAGCCAA-CAGACGGTCGGCGACGAACTCAATGTATTGGCACATGAGCTTGGAG 14714 Query 794067 TTCATGCCGATGAGCGCCACGGGCAG 794092 ||||| || ||||| || || || || Sbjct 14713 TTCATACCAATGAGGGCAACAGGAAG 14688 >seq7560 Length=1463 Score = 95.1 bits (104), Expect = 2e-13 Identities = 194/285 (68%), Gaps = 9/285 (3%) Strand=Plus/Minus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || || |||| || || | | || |||| |||||||| Sbjct 279 TGCCGTCGGTGCCGTTCTTGAAGCCGATGGGGGCCGAAATGCCGGAGGCCAGTTCGCGGT 220 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCA--- 2175192 | |||||||| ||||||||||||||||| | ||||||||| | ||||| | | Sbjct 219 GGACCTGGCTTTCGGTGGTGCGCGCGCCGATGGCGCCCCAACTGATCAGGTCGCCGATGT 160 Query 2175193 AATAGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGA 2175252 | | ||||| | || | || |||||| || | ||| ||| | | | || Sbjct 159 ACTGGGGCGAAATCA---CGTCCAGGAACTCGCTGCCCGCCGGCACGCCCAGGCGGTTGA 103 Query 2175253 CCAGGTCGCGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGT 2175312 | | ||||| | || ||||||| | ||||| || | | |||| | |||| Sbjct 102 TGTCGATGAGCAGCTGGCG-CGCGATGCG--CAGGCCCTCGTCGATGCGGTAGCTGCCGT 46 Query 2175313 CGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGC 2175357 | |||| ||||||| || |||||||||||| || ||||| |||| Sbjct 45 CCAGGTAGGGGTCGTTGATCAGGCCCTTCCAGCCCACGGTGGTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915145529668211