Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1988 152 3e-32 seq105 129 4e-25 >seq1988 Length=7662 Score = 152 bits (168), Expect = 3e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | || | || || ||||||| ||||||||||||||||||||| ||||| | Sbjct 4088 TTCCTCCACGCAGACGAAGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAG 4029 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| |||| |||| || || |||||||| || ||||||| ||||||||||| | | Sbjct 4028 AAAGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAG 3969 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||||||||| | || || ||||| | |||| ||| || ||||| Sbjct 3968 GAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGA 3909 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| || ||||| ||||| | ||||| || ||||||||||| Sbjct 3908 CTTCGAGGGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 Score = 143 bits (158), Expect = 2e-29 Identities = 159/211 (75%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 34768 GACCA-GGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGT 34826 ||||| |||| | ||| ||||||||||| ||||| || || || ||| |||| |||| | Sbjct 4298 GACCAAGGTGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCT 4239 Query 34827 CCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGT 34886 | || ||||| || |||||||| || || ||||||||| |||| | ||||||||||| | Sbjct 4238 CAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCT 4179 Query 34887 TTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 || ||| |||||| | |||| ||| | |||||| |||| || ||||||| Sbjct 4178 GGATCTTTGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCT 4119 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || | ||||| || ||||||||||| Sbjct 4118 TTCCGGTCAAAGTCTTGACGAAGATCTGCAT 4088 Score = 136 bits (150), Expect = 3e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || || | ||||||||||||||| || || || ||||| || |||| |||| || || Sbjct 3780 AGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGAGC 3721 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| ||||||||||| || || |||||||| | || | ||||||||||| | || Sbjct 3720 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGATC 3661 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 ||| |||||| | || | || || |||||| || | || |||||||| || Sbjct 3660 TTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCA 3601 Query 34952 GTGAGGGTCTTTACAAAGATCTGCATGA 34979 || ||||||||||| ||||||||||||| Sbjct 3600 GTCAGGGTCTTTACGAAGATCTGCATGA 3573 Score = 114 bits (126), Expect = 8e-21 Identities = 156/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||||||||||| ||||| || || | || | || Sbjct 4867 AGGACAAGGTGGAGCGTACTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTACGACCGTCC 4808 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || |||||||||||||| || ||||| | || | ||||||||||| Sbjct 4807 TCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCC 4748 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| | ||||||| || | ||| || || | ||| || Sbjct 4747 TGAATCTTGGCCTTGAC----GTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 4692 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| ||||| | ||||| || ||||| |||||| Sbjct 4691 AGTCTTACCCGTCAACGTCTTGACGAAGATTTGCATG 4655 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 8/210 (4%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | ||| ||||||||| || || || ||||| ||| |||| |||| || ||| Sbjct 4575 AGGTGGAGGGTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAAGT 4516 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| ||||| ||||| || ||||| ||||| | || | ||||||||||| | || Sbjct 4515 TGCTTACCGGCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAATC 4456 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 ||| || || || | ||||| ||| | |||||| || | ||| |||||||| Sbjct 4455 TTTGCCTTAAC--AT--TGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTT 4400 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||||| || ||||||||||| Sbjct 4399 GCCGGTCAAAGTCTTCACGAAGATCTGCAT 4370 >seq105 Length=629 Score = 129 bits (142), Expect = 4e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| || |||||||| |||||||| ||||| || || | || |||| || ||| Sbjct 585 AGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGAGT 526 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || ||||||||||| ||||||||||| | || | || |||||||| | ||| Sbjct 525 TGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATT 466 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || ||| | |||| || | |||||| || | || ||||| || || Sbjct 465 TTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCCT 406 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| |||||||||||||| Sbjct 405 GTGAGCGTCTTGACAAAGATCTGCAT 380 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||||||| ||||| || || || || | || |||| Sbjct 363 AGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTCCGGCCATCC 304 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| |||||||| || ||||| || ||| | || | ||||||||||| Sbjct 303 TCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCTGGGGGAATGCCCTCCTTGTCT 244 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || | || | || | |||||| || | ||| || ||| Sbjct 243 TGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCGACCTCCAAGGTGATCGTC 184 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| ||||| || ||||| ||||| Sbjct 183 TTGCCCGTGAGAGTCTTAACGAAGATTTGCAT 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325651720876031