Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1988 98.7 8e-16 seq105 84.2 2e-11 >seq1988 Length=7662 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 29596 TCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATAT 29655 || || || ||||| ||||| | | ||||||| ||| || || || |||||||| | Sbjct 4278 TCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAG 4219 Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTT 29715 || | | ||||| || |||||||||||||| ||||| || | ||| ||||| | Sbjct 4218 ATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTTGCCTTGACGTTG 4159 Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775 || | |||||||| || || |||||||| || || || || || || || || || Sbjct 4158 TCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCGGTCAAAGTCTTGACG 4099 Query 29776 AATATCTGCATT 29787 || ||||||||| Sbjct 4098 AAGATCTGCATT 4087 Score = 82.4 bits (90), Expect = 6e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 29578 ACCAA-ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||||| ||| || ||| || || || || || ||||||| | ||||| ||| || Sbjct 3784 ACCAAGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTC 3725 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 ||| || ||||| || | || | | ||||| || || ||||||||||| |||||||| Sbjct 3724 GAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTG 3665 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 | ||| ||||| | || | || || || || || || || || || || || Sbjct 3664 GATCTTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTT 3605 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| | ||| || || || |||||||| Sbjct 3604 GCCAGTCAGGGTCTTTACGAAGATCTGCAT 3575 >seq105 Length=629 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 |||||||| || ||||||||||| || || | | || || ||| |||||||| Sbjct 582 TGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGAGTTGC 523 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 |||||||| | |||| | |||||| || || || || || || |||||||| | ||| Sbjct 522 TTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATTTTC 463 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 || || | || | ||||| ||| || || || | || || ||||| || || Sbjct 462 GCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCCTGTG 403 Query 29764 AAGGTTTTAACAAATATCTGCATT 29787 | || || ||||| ||||||||| Sbjct 402 AGCGTCTTGACAAAGATCTGCATT 379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385170612904209