Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_023588.1 Length=33525 Score E Sequences producing significant alignments: (Bits) Value seq9209 273 5e-69 >seq9209 Length=729 Score = 273 bits (302), Expect = 5e-69 Identities = 335/454 (74%), Gaps = 29/454 (6%) Strand=Plus/Minus Query 3695 GTTGAAGCGCTCGCCGGTCCAGAAGTCGAAGGCTTCATGCGCCATGGTGGACGGCGTGCT 3754 |||| |||||||||||||||| || |||| |||||||| | |||||||||| Sbjct 667 GTTGCGGCGCTCGCCGGTCCAGTAGGGATAGGCAGGATGCGCCACGCTGGACGGCGTCGA 608 Query 3755 GAAGTAGGTCTTGCGCCACTTCTTGTGCATCGCCATGCCGCTGGCGACCTTGTTCAGCTG 3814 ||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| | Sbjct 607 GAAGTAGGTTTTGCGCCACTTCTTGTGGGTCGCCATGCCCGAGGCGACCTTGTTCAGTTC 548 Query 3815 GTTGAAACCGTAGGTCCAGAAGAACTCGTCAAAGTAGAAATTGCCGTGGTAGCCCTGTGC 3874 | ||| || | ||||||||| ||||| || ||||||||||||||| |||||| || Sbjct 547 CTCGAACGAGTGGACCCAGAAGAATTCGTCGAAATAGAAATTGCCGTGGCGGCCCTGCGC 488 Query 3875 GGTGCGGGCGTTGGTGCCCAGGAAGAACAGCTCGG----CGCCATT------GGC--CAG 3922 |||||| ||||||||| |||||| ||| |||| |||| | ||| ||| Sbjct 487 CGTGCGGAAGTTGGTGCCGAGGAAGTGCAGTTCGGCCGCCGCCTCTTCCTCCGGCCGCAG 428 Query 3923 ------GGTG------ATCGGGTCGCCGGTCAG-GTCACGGTCCAGCACCTCACGCACGA 3969 |||| ||||| |||||| ||| ||||| | ||| || || ||| Sbjct 427 GTCCGAGGTGATCAGCATCGGATCGCCGCCCAGCGTCAC-GCCCACCAGCT---TGGCGA 372 Query 3970 AGCCCCGCATATAGCCGAGGAAGATGTGCGCTTGGCTCTTGGATGCGCTCAGGAAAATCT 4029 ||| || |||| | |||| |||||| ||| || ||||| |||||| |||| Sbjct 371 AGCTGACGATGTAGCTGCGGAACTGGTGCGCCTGGGCTTTCGATGCCGACAGGAAGATCT 312 Query 4030 GGTTGCGGCCGGTGGTCAGCGCGTCGATCAGCGCCTCGCGGGCGAAGTAGTAGGTGGCAC 4089 |||| |||||||| | |||||||||||| || ||| ||||||||||||||| || | Sbjct 311 GGTTACGGCCGGTCTCGATCGCGTCGATCAGGGCTTCGAAGGCGAAGTAGTAGGTCGCGC 252 Query 4090 CGATCTGGCGCGACTTCAGGATGATGCGCGTGCG 4123 |||||||||| ||||||||||| ||||| ||||| Sbjct 251 CGATCTGGCGTGACTTCAGGATCATGCGGGTGCG 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107145230835406