Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_023724.1 Length=62991 Score E Sequences producing significant alignments: (Bits) Value seq10123 87.8 7e-13 seq9051 82.4 3e-11 >seq10123 Length=609 Score = 87.8 bits (96), Expect = 7e-13 Identities = 194/282 (69%), Gaps = 12/282 (4%) Strand=Plus/Plus Query 52770 GTGACCCGCAAGGGTGCCATCAGCGCGAAGCTCGGCGAGCGTGGCCTGATCCCGGGAAGC 52829 |||||||||||||| || | || ||| ||||||| || | ||||| || ||| Sbjct 209 GTGACCCGCAAGGGCGCGGTATCGGCCAAGGAAGGCGAGCTGGGGATCATCCCCGGCAGC 268 Query 52830 ATGGGCACCGCATCCTATGTCGTCACCGGCAAGGGCAACCCGCAGGG--TCTGCAGTCTG 52887 |||||| | || | |||| ||||||||||||| || | ||||| ||| Sbjct 269 ATGGGCGCGAAGTCGTTCATCGTGCGTGGCAAGGGCAACCGCGAGAGCTTCTGCTC-CTG 327 Query 52888 CGCCTCACGGCGCCGGCCGAAGGTTCTCCCGAACCAAAGCTCGCAAGCTGTTCACCGTCG 52947 | | || ||||| ||||| | | | ||||| | | | || ||||||| ||||||||||| Sbjct 328 CTCG-CATGGCGCTGGCCGGAAGATGTCCCGTAACGAGGCGCGCAAGCAGTTCACCGTCG 386 Query 52948 ACGACC---TGGCTGACCGTATGCGCGGCATCGAGTACCGCCACGGTGAGGCGTG-GGTC 53003 | |||| | || | || ||| ||| | |||| |||| | | |||| ||| | || Sbjct 387 AGGACCATATCGCGG--CGACTGC-CGGTGTGGAGTGCCGCAAGGACGAGG-GTGTGCTC 442 Query 53004 GACGAAATCCCGGACGCTTACAAGCCGATCGACGTTGTGATG 53045 ||||| | || | || |||||| |||||||| |||||| Sbjct 443 GACGAGACGCCCGCAGCCTACAAGGACATCGACGTGGTGATG 484 >seq9051 Length=1431 Score = 82.4 bits (90), Expect = 3e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 52000 TGCCGTTCGTGCATCCGCACGTTGCCCTCATGCCCGACGCGCACGTCGGCAAAGGTTCGT 52059 |||| ||| | || | ||| |||| |||||||||| | ||| |||| || || Sbjct 836 TGCCCTTCATCCACCGCCACATTGCGATCATGCCCGATGTCCACTGGGGCATGGGCGCGA 895 Query 52060 CTGTTGGTACCGTCATCCCCACCCGCGGCGCAGTCATCCCCGCCGCGGTCGGTGTCGACA 52119 | |||||| | || ||||| ||| ||| ||||||| || |||||||| || |||| Sbjct 896 CCGTTGGTTCGGTGATCCCGACCAAGAACGCCATCATCCCGGCAGCGGTCGGCGTGGACA 955 Query 52120 TCGGCTGCGGCATGATCGCC 52139 ||||||| |||||||| ||| Sbjct 956 TCGGCTGTGGCATGATGGCC 975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201420991880328