Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_024134.1 Length=139020 Score E Sequences producing significant alignments: (Bits) Value seq7972 192 5e-44 >seq7972 Length=7339 Score = 192 bits (212), Expect = 5e-44 Identities = 414/616 (67%), Gaps = 5/616 (1%) Strand=Plus/Minus Query 135424 ATAATGGTCGTCCGGGTTTAATAAGTATTTGTTATACCCTGTATCATACCCTTTAGGTAT 135483 ||||||||| ||| | |||| | ||| |||||||| | | ||||| || | ||||| Sbjct 7050 ATAATGGTCTTCCTGATTTATCAGGTACTTGTTATATGCAGGGTCATATCCCCTTGGTAT 6991 Query 135484 ATAGATTTTGTTAAGCGGTTTCTGGGTGCGATCTTTTGCATATACAAGCAAAAAGTTTGC 135543 | || || || | || ||| | | || ||||| || | || | |||| || Sbjct 6990 CCATATCTTTTTGATTGGCTTCCTGCTCTTATTCTTTGCGTAAATCAGTATGTAGTTAGC 6931 Query 135544 TGTGGAGAAAACTGTAGCTCCTGTTGCCTTAAATCCTGAAGGGGAGTTTGTGGTCATCGA 135603 || || ||||| || || || || ||||| || || || ||| |||||||||| || Sbjct 6930 GGTAGAAAAAACGGTTGCCCCGGTAGCCTTGAAGCCGGAGGGGTCATTTGTGGTCAGCGT 6871 Query 135604 TATGGTATTTAACTGATTTGCA-CGACCAAAAATCTCGTCCATCAAAACTTTTAAATACG 135662 || || || | | | |||| || ||||| | ||| || | | ||| || |||| | Sbjct 6870 GATCGTGTTGCAAT-AGTTGCTGCGCCCAAACACCTCATCAAGTAGAACCTTGCAATATG 6812 Query 135663 CCATTTCGCAATCATCTAAGTGAACGAATATTACCCCATCATCACTTAGAAGATTACGAA 135722 |||| || ||||||| | ||||| | ||||||||| || | || || | || Sbjct 6811 CCATCTCTGAATCATCGAGATGAACCGCCAATACCCCATCCTCTCCAAGGAGTCTTTTAA 6752 Query 135723 TTATTTCTAACCTATCCCTCATTAAGCCCAGCCAAATGGAATGCTCCAGGCTATCATCGT 135782 |||||| || | ||| | ||||| || |||||||| |||||||| | | ||||| | Sbjct 6751 ATATTTCAAAGCGATCTCGCATTAGTCCGAGCCAAATCGAATGCTCGACACCGTCATCAT 6692 Query 135783 AGTGCTCAAAAGCCCTTCCGGTATTGAATGGTGGGTCGATGTAAACACACTTCACTTTGC 135842 | ||||| || || || || || || || || ||||| || || | ||||| | | | Sbjct 6691 AATGCTCGAACGCACTCCCCGTGTTAAACGGCGGGTCAATATAGATGCACTTAATCTCCC 6632 Query 135843 CTGTATACTCTTGCTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGTTTAT 135902 ||| | ||| || || | || ||||| || | ||||| || ||||||||||| | Sbjct 6631 CTGAAAGCTCATGTTCCAATGCTTTCAACGCCAGCAAGTTGTCACCAAAAATCAGCCGGT 6572 Query 135903 TATCAAAAATATCGTTTTCGGTCAC---TTTCTGGCTGCGGTAAGACTTGCTCGAATCTT 135959 | || || || ||||| || ||||| | || | | | || ||||| || ||||| Sbjct 6571 TGTCGAAGATGTCGTTGTCCGTCACGCGATGCTTGGCGTGATACGACTTTTCCGGATCTT 6512 Query 135960 CTAACAAAATGTGCGGCTCTAGCTTTTTGCGCTCGTTTTTACCTATCCAGGTAAGTTCTA 136019 | | || ||| ||||||| ||||| |||| | || || ||||| || ||||| | Sbjct 6511 CCAGCAGGATGCGCGGCTCCAGCTTGGGCCGCTTCTCCTTGCCGATCCAAGTCAGTTCAA 6452 Query 136020 ATTTAGTTTTGCTCAT 136035 ||| |||||||| Sbjct 6451 GTTTTTGCTTGCTCAT 6436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444678467839200