Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1988 145 7e-30 seq1347 116 4e-21 seq176 107 2e-18 seq105 100 3e-16 seq3402 87.8 2e-12 >seq1988 Length=7662 Score = 145 bits (160), Expect = 7e-30 Identities = 159/209 (76%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||| ||| ||||| ||||||||||| | ||| | | | || ||||||| Sbjct 3778 ATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCA-TCTTCGAGCT 3720 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | ||||| |||||||||||||| || || || |||||||| ||||| Sbjct 3719 GCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGATCT 3660 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||||| | |||| || |||| || ||| || |||| |||| ||| ||||| | Sbjct 3659 TTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCAG 3600 Query 133636 TCAGAGTTTTTACGAAAATCTGCATGGCT 133664 |||| || |||||||| ||||||||| || Sbjct 3599 TCAGGGTCTTTACGAAGATCTGCATGACT 3571 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 133458 TGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTG 133516 |||| ||| ||| ||||| || ||||||||| | ||| ||| | ||||| ||||| Sbjct 4290 TGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCA-TCCTCAAGCTG 4232 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| ||| | ||||| ||||||||||| || || || || |||||||| |||||| Sbjct 4231 CTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTT 4172 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | ||||| | || | |||||| | | ||| || || | |||| ||| || ||||| Sbjct 4171 TGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCGGT 4112 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || ||| || ||||| |||||||| Sbjct 4111 CAAAGTCTTGACGAAGATCTGCAT 4088 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| ||||||||||| || ||| | | | ||||| || ||||| | Sbjct 4567 GGTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCA-TCCTCAAGTTGCTTAC 4509 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| || || ||||| ||||| ||||| |||||||| |||||| || Sbjct 4508 CGGCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTGCCT 4449 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || || | | ||| || || | ||||| ||| |||||||||| || Sbjct 4448 TAACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCAAAG 4389 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 4388 TCTTCACGAAGATCTGCAT 4370 Score = 107 bits (118), Expect = 2e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||||||||| |||||||| ||| | || || ||||| |||||||||||||| || ||||| Sbjct 4811 GTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGAGGGATACCCTCCTT 4752 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||| ||||| | || | ||||||| | |||||| |||| ||||| Sbjct 4751 GTCCTGAATCTTGGCCTTGACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 4692 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || |||| || || ||||| || |||||| Sbjct 4691 AGTCTTACCCGTCAACGTCTTGACGAAGATTTGCATG 4655 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || || | || | || |||||||| ||||| ||||| |||||| Sbjct 4014 TCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGAATGCCCTCCTTG 3955 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | |||||| | || ||| || |||| ||||| Sbjct 3954 TCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGACTTCGAGGGTGATC 3895 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| |||| || || ||||| |||||||| Sbjct 3894 GTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 >seq1347 Length=113524 Score = 116 bits (128), Expect = 4e-21 Identities = 292/434 (67%), Gaps = 11/434 (3%) Strand=Plus/Minus Query 148317 GGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCT 148376 |||||||| |||||||| |||||| ||||| ||| | || || |||||| || Sbjct 32978 GGTTCAAAGCACTCGTTGAAGCCCAAGATCTGACTGGTAGAAGCGGTAGGCATGGGTGCA 32919 Query 148377 ACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCG-CCCAGTC 148435 | || ||| ||||| | | ||| || | || ||||| ||| ||||||| Sbjct 32918 AGCAACAGGGAGTTCCTGATGCCGGTCCTTGCGACCTTCTCCTTCA-AGCTATCCCAGTC 32860 Query 148436 CCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGG 148495 |||||| || || || || ||||||||||||||| | ||||| | ||| | || Sbjct 32859 CCAGAGATCCGTAGGAGTAACACCCCACATGTCGTACTGGAAGATGCCCCTGCTGACAGG 32800 Query 148496 GCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAG 148555 ||||| ||||||| ||| || || | | | | || || || | ||| || ||||| Sbjct 32799 ACTGCCTTCGTACGTCTCGTAAGGACCATCCCTCTCGGCAAGATCACTGCTGGCGTCGAG 32740 Query 148556 CGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG---CT 148612 || ||| || || |||||| || ||| ||||||| | | || || |||| Sbjct 32739 AGCAGCGTGATAGATAGTCTCGAAGATCTGCTTGTTGAG--GTGACG-CGCCTCGGGAGA 32683 Query 148613 TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAAT 148672 ||| |||||| || || || |||||||| || || || | || || | |||||| Sbjct 32682 GTCGAACGGCAGCCGAAGGATCATGAACGCGTCAGCGAGACCGTTCACACCGATGCCAAT 32623 Query 148673 GGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGATAGTGGTTGCGGTCGA 148731 ||| ||||| |||||||| | || || ||| | | || |||| |||| ||| | Sbjct 32622 GGGACGGTGGCGCATGTTGGAACGACGAGC-CTCGGGAATTGGGTAGTAGTTGATGTCAA 32564 Query 148732 TGATCTTG-TCAAG 148744 |||||||| ||||| Sbjct 32563 TGATCTTGTTCAAG 32550 >seq176 Length=24199 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 |||||||| ||||| || |||| |||||||||||| ||||| || ||| |||||| Sbjct 19889 AGGCACGCGAAGTCAGTATGCATGCCCTCGTCGCGGCTGATCAGTTCATTGGAGAACGTC 19830 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 | ||| ||||||| ||| || |||||| |||| |||| ||||| |||||| ||| Sbjct 19829 AAGCCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGACGCAAACGAGCCCGAGAAG 19770 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-CT 120818 || | || || || |||||||| || | || ||||| |||| | | ||||| || Sbjct 19769 AAGATTCCTTCAACCGCAGCAAAGGCAACGAGTCGTTCGGCGAACGCGGACTTCTTGTCT 19710 Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTTTTT 120851 | |||||| | ||||| || ||||| || Sbjct 19709 G-AGATCCAGCGTAAAGCCCAGTCAGCCTTCTT 19678 >seq105 Length=629 Score = 100 bits (110), Expect = 3e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || |||||||| | || | | | |||||||||||||| | Sbjct 349 GGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTCCGGCCA-TCCTCGAGCTGCTTTC 291 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| || || || || || || ||||| |||||||| |||||| || Sbjct 290 CAGCGAAGATGAGACGTTGTTGATCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCT 231 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||||| | ||| || || | ||||| || ||||| || |||| Sbjct 230 TCACATTGTCAATAGTGTCGGACGACTCGACCTCCAAGGTGATCGTCTTGCCCGTGAGAG 171 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 170 TCTTAACGAAGATTTGCAT 152 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || ||||| |||||||| ||| | || || || ||||||||||| ||||| ||||||||| Sbjct 534 TCTTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTG 475 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||| || ||| | | |||| |||||||| | ||| || || | || | | Sbjct 474 TCTTGGATTTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATG 415 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || || || || || |||||||| Sbjct 414 GTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCAT 380 >seq3402 Length=1793 Score = 87.8 bits (96), Expect = 2e-12 Identities = 82/102 (80%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || |||||||||| | ||| ||| | |||||||| Sbjct 1401 AAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTGAGAGTGCGACCA-TCCTCGAG 1459 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGAT 133555 ||||||||||||| | || || |||||||||||||| ||||| Sbjct 1460 CTGCTTGCCCGCGAAGATCAGTCGCTGCTGGTCGGGGGGGAT 1501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483358263476760