Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq9209 219 1e-52 seq10129 87.8 5e-13 seq10305 80.6 7e-11 >seq9209 Length=729 Score = 219 bits (242), Expect = 1e-52 Identities = 363/517 (70%), Gaps = 38/517 (7%) Strand=Plus/Minus Query 9536 CGCAG-CGCGGTGTGGCTCACGTCGATCTTGACCTGTTTGTCCTTGGCCTT--GCCGC-G 9591 ||||| ||||| ||||| ||||||||| ||| | | ||||| ||| ||||| | Sbjct 724 CGCAGGCGCGGCATGGCTGACGTCGATCGAGACGCGCTCTTCCTT---CTTCCGCCGCCG 668 Query 9592 GTTGAACAGTGCGCCGGACCAGAACGGGTAGGCCTCATGCGACAAGCTGGACGGCGTGGA 9651 |||| | |||||| |||| | || ||||| ||||| || |||||||||||| || Sbjct 667 GTTGCGGCGCTCGCCGGTCCAGTAGGGATAGGCAGGATGCGCCACGCTGGACGGCGTCGA 608 Query 9652 GAAGTACGTTTGCCGCCAGTGCTTGTGGATCGCCATGCCGGACGCGACCTTGCGCAGTTC 9711 |||||| |||| ||||| | ||||||| |||||||||| || ||||||||| |||||| Sbjct 607 GAAGTAGGTTTTGCGCCACTTCTTGTGGGTCGCCATGCCCGAGGCGACCTTGTTCAGTTC 548 Query 9712 CTGGAAGCGCG-GCACCCAGAAGTACTCGTCGAAGTACAGGTTGCCGTGGTAGCTCTGCG 9770 || ||| || | | ||||||||| | |||||||| || | ||||||||| || ||||| Sbjct 547 CTCGAA-CGAGTGGACCCAGAAGAATTCGTCGAAATAGAAATTGCCGTGGCGGCCCTGCG 489 Query 9771 CGGTGCGGGCGTTGGTCCCGAGGAAGTACAG------CGTCGCC-----------CCGTT 9813 | |||||| |||||| |||||||||| ||| || |||| ||| Sbjct 488 CCGTGCGGAAGTTGGTGCCGAGGAAGTGCAGTTCGGCCGCCGCCTCTTCCTCCGGCCGCA 429 Query 9814 GGGC-------AACACCATCGGGTCGCCCTTCAGCTCGACGCCGGCTGCGTCCTTCGCGA 9866 || | | || |||||| ||||| |||| |||| | | ||| |||| Sbjct 428 GGTCCGAGGTGATCAGCATCGGATCGCCGCCCAGCGTCACGC---CCACCAGCTTGGCGA 372 Query 9867 ATTGGATGATGTA-CTGCTTGAAGACGTGCGCCTGTGCCTTGCTGGCCGATAGAAAAATC 9925 | || |||||| |||| ||| ||||||||| || || ||||| || || ||| Sbjct 371 AGCTGACGATGTAGCTGC-GGAACTGGTGCGCCTGGGCTTTCGATGCCGACAGGAAGATC 313 Query 9926 TGGTTGCGGCCAGTGGTCAGCGCGTCGATGAACGCCTCGCGTGCGAAGTACCACGTCGCG 9985 ||||| ||||| || | ||||||||| | || ||| |||||||| | |||||| Sbjct 312 TGGTTACGGCCGGTCTCGATCGCGTCGATCAGGGCTTCGAAGGCGAAGTAGTAGGTCGCG 253 Query 9986 CCGATCTGCCGGCTCTTGAGCAGGTTGCGGATGCGCT 10022 |||||||| || ||| || | ||||| |||||| Sbjct 252 CCGATCTGGCGTGACTTCAGGATCATGCGGGTGCGCT 216 >seq10129 Length=874 Score = 87.8 bits (96), Expect = 5e-13 Identities = 208/308 (68%), Gaps = 10/308 (3%) Strand=Plus/Plus Query 37043 CGACTGGCTGCCGCTGTTGTGGCAAGCCTTCGGCGCGAAGGGCTTGGTGGCGCTCGCCTT 37102 ||||||||| || ||||| |||| |||| | |||||||| |||||||||||||| Sbjct 96 CGACTGGCTTCCCGATCTGTGGACCGCCTACGGCCCCAAGGGCTTCGTGGCGCTCGCCTT 155 Query 37103 TTGGTTCGGGAGCCTATTCGCGGAGCAGATCCGCCAGTCCCACAAGA-GCTATCCATTCC 37161 | | | || ||| ||| |||||||||| | | || | ||| | |||| Sbjct 156 CTTCACCATGTCGCTTTTCTCGGTGCAGATCCGCAACCGCGACGACTCGCTCGGC-TTCC 214 Query 37162 TGGAGCTGGTCGGCGAGCCTGGGGCCGGTAAGACTACGCTGATTGAATTTCTCTGGAAGC 37221 | || | |||| ||| || |||| ||||| |||||||| | || |||||||||| Sbjct 215 TCGAAATCACCGGCCTGCCCGGCTCCGGCAAGACCACGCTGATCGTGTTCCTCTGGAAGC 274 Query 37222 TGTGCGGCCGACGCGATTACGAGGGCTTCGACCCCAGCAAG---TCGTCCCTGGCGGCGC 37278 || |||||| | | |||| |||| |||||| | | | ||| || ||| | Sbjct 275 TGCTCGGCCGCCTGAACCACGAAGGCTACGACCCGAACCGGGGCTCGGCC---GCGTTCC 331 Query 37279 GCGCGCGGAACTTCGCGCAGGTGTCCAACCTTCCGGTGGTGCTGATCG-AGGCAGACCGG 37337 || || | | | | ||| ||| ||||||||||| | ||||||| ||||| | ||| Sbjct 332 TCGGCCGCATCATGATGAAGGCGTCAAACCTTCCGGTCGGCCTGATCGAAGGCA-AGCGG 390 Query 37338 GGCGAGGA 37345 | ||| || Sbjct 391 GACGATGA 398 >seq10305 Length=535 Score = 80.6 bits (88), Expect = 7e-11 Identities = 99/132 (75%), Gaps = 9/132 (7%) Strand=Plus/Minus Query 13846 GTGGAGCTGATCTGATG-----CGCGTGCGGGCCATCCAGGGCGACACCATCGACGCCAT 13900 |||||| |||||||||| ||| || || || | ||||||||| | |||||||| Sbjct 164 GTGGAGTTGATCTGATGGCCACCGCTACCGCGC--TCGACGGCGACACCGTGGACGCCAT 107 Query 13901 CTGCCGGCGGGTGTACGGCCGCACG-GCGAGCGTGACGGAAGCCGTGCTGGCCGCCAACC 13959 |||| |||| | || ||||||||| ||| ||||||| ||| || ||||| ||||| Sbjct 106 CTGCTGGCGCGAGTTGGGCCGCACGCGCG-GCGTGACCGAACAGGTCCTGGCGCTCAACC 48 Query 13960 CCGGCATCGCCG 13971 | ||| |||||| Sbjct 47 CGGGCCTCGCCG 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127869083677432