Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq105 113 3e-20 seq1988 95.1 8e-15 >seq105 Length=629 Score = 113 bits (124), Expect = 3e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || || ||||| ||||| |||||||| ||||||||||| ||| | || || | ||| Sbjct 582 TGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGAGTTGC 523 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || |||| ||| ||||| || | || | ||||| ||||| |||||| Sbjct 522 TTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATTTTC 463 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| || | ||| | |||||| || || || || | ||| || ||||| ||||| Sbjct 462 GCCTTC-ACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCCTGT 404 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | ||| || |||||||||||||| Sbjct 403 GAGCGTCTTGACAAAGATCTGCAT 380 >seq1988 Length=7662 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 ||||| || ||||| || || ||||||||||||||||| ||||| | || || | || Sbjct 4290 TGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAAGCTGC 4231 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | ||||||||| ||| |||| | ||| || ||||| || || Sbjct 4230 TTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTT- 4172 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | || | ||| | ||||| || || || |||| ||||| || || || || Sbjct 4171 TGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCGGT 4112 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || || || || ||||||||||| Sbjct 4111 CAAAGTCTTGACGAAGATCTGCAT 4088 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 33541 ACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| || |||||||| || || || |||||||| ||||| ||||| | || || Sbjct 3784 ACCAAGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTC 3725 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | || || ||||| || || | ||||||||| || | || | ||| || ||||| Sbjct 3724 GAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTG 3665 Query 33660 AATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || || | || | |||| ||| ||| || || || || | |||||| || | Sbjct 3664 GATCTT-TGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCT 3606 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | || ||||| ||||||||||| Sbjct 3605 TGCCAGTCAGGGTCTTTACGAAGATCTGCAT 3575 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || |||||||| || || |||||||| || || || ||||| | || || | || Sbjct 4062 TGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGCTGC 4003 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| ||||| |||||||| ||||| || | || | || || ||||| || || Sbjct 4002 TTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTA 3943 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | ||| ||| | ||||| || || || || | |||||||| || || || Sbjct 3942 GCCTTGA-CATTGTCGATCGTGTCAGAGGACTCGACTTCGAGGGTGATCGTCTTGCCCGT 3884 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 ||||| || || |||||||||||| Sbjct 3883 CAACGTCTTGACGAAGATCTGCATA 3859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328662541078080