Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2768 105 2e-17 seq105 104 6e-17 seq1988 93.3 1e-13 seq4155 89.7 1e-12 >seq2768 Length=3315 Score = 105 bits (116), Expect = 2e-17 Identities = 76/88 (86%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 204769 GTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 204828 |||||| |||||||| ||||||| ||| |||||| ||||||||| ||||| || ||||| Sbjct 2827 GTGAAGGGTAGACTCCTTCTGGATATTGTAGTCACTCAAAGTCCTGCCATCCTCGAGCTG 2886 Query 204829 CTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||| ||||||||||| || ||||||||| Sbjct 2887 CTTGCCGGCGAAGATGAGTCGTTGTTGA 2914 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 ||| |||| ||||||||||| |||||| | || ||||| ||||||||| || ||||| Sbjct 2910 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCAGGACTTTGAGTGACTACAAT 2851 Query 206350 GTCCAGAAAGAGTCTACTCTTCAC 206373 ||||||| |||||||| |||||| Sbjct 2850 ATCCAGAAGGAGTCTACCCTTCAC 2827 >seq105 Length=629 Score = 104 bits (114), Expect = 6e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| ||||||||||| ||||| || || ||||| || || ||| ||| Sbjct 383 CAGATCTTTGTCAAGACGCTCACAGGGAAAACCATTACGTTGGAGGTCGAGTCTTCCGAC 442 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || ||||| || |||||||| || ||| ||| Sbjct 443 ACGATTGACAACGTGAAGGCGAAAATCCAAGACAAGGAAGGAATCCCACCCGACCAGCAA 502 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || ||||| | ||||||||| | || | |||| |||||| | Sbjct 503 CGTCTGATCTTCGCTGGCAAGCAACTCGAAGATGGACGTACACTCTCCGACTACAACATT 562 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 || || ||| ||| |||||||||| Sbjct 563 CAAAAGGAGAGTACGCTTCACCTTG 587 Score = 93.3 bits (102), Expect = 1e-13 Identities = 77/93 (83%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358 |||||||| || ||||||||||| ||||| | || ||| | ||||||||| ||||||| Sbjct 1 ATCTTCGCTGGCAAGCAGTTGGAGGATGGTCGTACCTTGTCGGATTACAACATCCAGAAG 60 Query 206359 GAGTCTACTCTTCACCTTGTTTTGAG-ACTTCG 206390 ||||| ||||||||||||| | || | |||||| Sbjct 61 GAGTCCACTCTTCACCTTGGTGTGTGCACTTCG 93 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | | || |||||||| |||||||| ||||||| || || |||| | ||| Sbjct 373 TCGAAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGT 314 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 || ||||| || ||||||||||| |||||||| || ||||||||| Sbjct 313 CCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGA 268 >seq1988 Length=7662 Score = 93.3 bits (102), Expect = 1e-13 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || ||||| |||| || || |||||| || |||| || ||| | Sbjct 4394 ACCGGCAAGACCATCACCCTGGAGGTCGAGTCTTCTGATACCATCGACAATGTTAAGGCA 4453 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || || || ||| || ||| ||| | || ||||| ||||| ||| Sbjct 4454 AAGATTCAAGACAAGGAGGGCATTCCTCCTGACCAACAACGTCTCATCTTTGCCGGTAAG 4513 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | || ||||| | || || | |||||||| ||||||| |||||||| || ||| Sbjct 4514 CAACTTGAGGATGGCCGCACCCTGTCGGATTACAATATCCAGAAGGAGTCTACCCTCCAC 4573 Query 206374 CTTG 206377 |||| Sbjct 4574 CTTG 4577 Score = 91.5 bits (100), Expect = 3e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || ||||| || |||||| | || || || |||||| Sbjct 4091 CAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCGTCTGAC 4150 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||| || || || || || ||| ||| ||| || Sbjct 4151 ACGATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCGCCAGACCAGCAG 4210 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || |||||| | || ||||| | || | ||||||||||| || Sbjct 4211 CGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTCTCCGATTACAACATC 4270 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| ||| ||| || ||||||| Sbjct 4271 CAGAAGGAGAGTACCCTACACCTTG 4295 >seq4155 Length=6849 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||| || || ||||||||||| | || ||||||| || ||||| || || || Sbjct 94 ACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTCCTGCCGTCCTCG 153 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||||||| |||||||| || |||||||| Sbjct 154 AGCTGCTTTCCAGCGAAGATGAGACGTTGTTG 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181664094624429