Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq176 178 2e-38 seq2980 167 3e-35 seq7560 107 3e-17 >seq176 Length=24199 Score = 178 bits (196), Expect = 2e-38 Identities = 374/544 (69%), Gaps = 19/544 (3%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| | |||| |||| || || || ||||| || || ||| | |||| Sbjct 19329 GATCTGGCAAATGTACAAGAAAG-CCGAAGCGTCATTCTGGACAGCGGAAGAGATGGACC 19387 Query 1455835 TCGGCGCC-GACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATC 1455890 | | || || | | | ||||| | ||| |||| ||||||||||||||||| Sbjct 19388 T-GTCGAAAGATATGCACGACTGGCAACACCGGTTGAACGACAACGAGCGCCATTTCATC 19446 Query 1455891 AAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950 || || || || ||| ||||| || || || || || |||||| || | | Sbjct 19447 TCTCATGTTCTTGC-TTTCTTCGCGGCTTCGGACGGTATTGTCAACGAGAATCTCGTTGA 19505 Query 1455951 CCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 || || || || |||||| | ||||| || | || || || ||||| ||| Sbjct 19506 ACGGTTCTCCAACGAAGTCCAAGCAGCTGAGGCCCGCTGCTTCTATGGCTTCCAAATCAT 19565 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || ||||| ||||| || || || || ||||| ||||| || ||| |||| |||| Sbjct 19566 GATGGAGAACATTCACTCCGAGACGTATTCCCTCCTCATCGATACGTACATCAAAGACCA 19625 Query 1456071 GGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 | | | ||| || ||||| ||||||||| ||| | || | | | ||| ||||| Sbjct 19626 GACCCAACGGGAGCATCTCTTCGACGCCATCGAAACGATTCCTTGCATCAAGAAGAAGGC 19685 Query 1456131 CGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTC 1456187 |||||||| | |||||| ||||| || || || || ||||| || ||| Sbjct 19686 TGACTGGGCTTTACGCTGGATCTCAGACAAGAAGT-CCGCG----TTCGCCGAACGACTC 19740 Query 1456188 GTCGGCTTTGCCGCG-TCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTG 1456245 || | |||||| ||| | || || ||||| ||||||||| || |||| ||||||| || Sbjct 19741 GTTGCCTTTGCTGCGGTTGAAGGAATCTTCTTCTCGGGCTCGTT-TGCGTCCATCTTCTG 19799 Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCG 1456305 |||||||||| | || |||||||| || ||| || ||| ||| | ||||| |||| Sbjct 19800 GCTCAAGAAGAGAGGTCTCATGCCTGG-CTTGACGTTCTCCAATGAACTGATCAGCCGCG 19858 Query 1456306 ACGA 1456309 |||| Sbjct 19859 ACGA 19862 >seq2980 Length=15283 Score = 167 bits (184), Expect = 3e-35 Identities = 371/546 (68%), Gaps = 23/546 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| ||||||| || ||||| || || ||||| ||||| || |||||| | || Sbjct 13976 GATCTGGCAAATGTAT-AAGAAGGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATGGATT 14034 Query 1455835 T--CGGCG--CCGACACGGTCCACTGGGTGTCG---CTGAGCGACGACGAGCGCCATTTC 1455887 | || | || |||| |||||| || | |||| | || || || ||| Sbjct 14035 TGTCGAAGGACCTCCACG----ACTGGGACAACAGACTCAACGACAATGAACGTCACTTC 14090 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||||||||||||| ||| || ||| ||||| || || ||||||||| | Sbjct 14091 ATCTCACACGTCCTCGCCTTCTTT-GCTGCCTCGGATGGTATTGTCAACGAGAACCTCGT 14149 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || || ||||| ||| | || || |||| || ||||| ||||| || Sbjct 14150 CGAGCGGTTCTCCAACGAGGTTCAAGCAGCTGAAGCTCGTTGCTTCTACGGCTTCCAAAT 14209 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || |||||||| || || || ||||| || || |||||||| ||| ||||||| Sbjct 14210 CATGATGGAGAACATCCATTCAGAGACATACTCCCTTCTCATCGACACATACATCAAGGA 14269 Query 1456068 CCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAA 1456127 ||| | || |||||||| || ||||| || | || | | | ||| || Sbjct 14270 CCCTAAGCAACGCGAGCACCTCTTCGATGCTATCGAGACCATTCCTTGCATCAAGAAGAA 14329 Query 1456128 GGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGG 1456184 ||| |||||||| || |||||| ||||| | ||| || || ||||||| Sbjct 14330 GGCTGACTGGGCCTTGCGCTGGATCTCGGACAAGAA----CTCTGCA-TTCTCCGAGCGT 14384 Query 1456185 CTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTT 1456243 || |||| || |||| ||||||||| ||||| ||||| ||| |||| | |||||| Sbjct 14385 CTTGTCGCGTTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCTTTCGCATCTATCTTT 14444 Query 1456244 TGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCG 1456303 ||| | |||||||| || | ||||| || ||| ||| || || || ||||| || Sbjct 14445 TGGTTGAAGAAGCGTGGTTTGATGCCTGG-CTTGACCTTCTCGAATGAGTTGATCAGCCG 14503 Query 1456304 CGACGA 1456309 ||||| Sbjct 14504 TGACGA 14509 >seq7560 Length=1463 Score = 107 bits (118), Expect = 3e-17 Identities = 201/285 (71%), Gaps = 9/285 (3%) Strand=Plus/Plus Query 165583 GCACGACCGTTGGATGGAAGGGCCTGGCCAGTGACCCCGATCTTGATGGCTCGTGCCGCC 165642 |||| ||||| || |||||||||||| || |||||| | || || ||| | |||| Sbjct 1 GCACCACCGTGGGCTGGAAGGGCCTGATCAACGACCCCTACCTGGACGGCAGCTACCGCA 60 Query 165643 TGGCTGATGGCCTTGATACATCGCGCCGCCTGCTGCGTGATCT-CGTCGTCGACGTCGAC 165701 | | || ||||| |||||||| ||| ||||| | ||| | || | | | | | Sbjct 61 TCGACGAGGGCCTGCG--CATCGCGC-GCCAGCTGC-TCATCGACATCAACCGCCTGGGC 116 Query 165702 CAACCCGTGGCCGTCGAGTTTCTCAGTCCTCTGGTGGCCCCC-TATTTGGCAGACCTGGT 165760 || | || | |||||| || | | | | ||||| || | | |||||| | Sbjct 117 GTGCCGGCGGGCAGCGAGTTCCTG-GACGTGATTTCGCCCCAGTACATCGGCGACCTGAT 175 Query 165761 CACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGT- 165819 || ||||||||| |||| |||||||||||||| |||||||| |||||||| |||| | Sbjct 176 CAGTTGGGGCGCCATCGGCGCGCGCACCACCGAAAGCCAGGTCCACCGCGAACTGGCCTC 235 Query 165820 CGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864 |||| | | || ||||| |||||||| ||| |||||||||||| Sbjct 236 CGGCATTTCGGC-CCCCATCGGCTTCAAGAACGGCACCGACGGCA 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176813019928538