Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1988 131 2e-25 seq105 107 2e-18 >seq1988 Length=7662 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 35534 TGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGC 35593 |||| ||||||||||| || ||||||||||||| | ||| || | || || |||||| Sbjct 4290 TGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAAGCTGC 4231 Query 35594 TTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTT 35653 || || || || || | ||||||||||| | |||| | |||||||||| ||||||| Sbjct 4230 TTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTT 4171 Query 35654 TGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 ||| | |||| | | |||||| ||| || ||||| | ||||| || || || || Sbjct 4170 GCCTTGA-CGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCGGT 4112 Query 35713 CAAAGTTTTCACAAATATCTGCATTC 35738 |||||| || || || |||||||||| Sbjct 4111 CAAAGTCTTGACGAAGATCTGCATTC 4086 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| ||||||||||| || | | ||| || | || || |||||||| || Sbjct 4056 GTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCA 3997 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| ||||| || |||||||| | ||||| || |||||||||| |||||| ||| Sbjct 3996 GCAAAGATCAAACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTG 3937 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | |||||| || || || || | |||||||| || |||||||| || Sbjct 3936 ACATTGTCGATCGTGTCAGAGGACTCGACTTCGAGGGTGATCGTCTTGCCCGTCAACGTC 3877 Query 35720 TTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 3876 TTGACGAAGATCTGCAT 3860 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598 |||||||||||| ||||||||||| || | | || || |||| || || ||||| || Sbjct 4853 CGTACTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTACGACCGTCCTCGAGTTGCTTGCC 4794 Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 || || |||| ||||| ||||| | ||| | | |||||||||| ||||| ||| Sbjct 4793 AGCGAAGATCAGTCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTGGCCTT 4734 Query 35659 CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | | | | |||||| || |||||||| | ||||| || ||||||||||| || Sbjct 4733 GACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAACGT 4674 Query 35719 TTTCACAAATATCTGCAT 35736 || || || || ||||| Sbjct 4673 CTTGACGAAGATTTGCAT 4656 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 35528 ACCAA-ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| ||| | || |||||||| || || |||||||| | | || || | || || Sbjct 3784 ACCAAGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTC 3725 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | ||||||||||| | |||| | ||||||||| Sbjct 3724 GAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTG 3665 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||||| ||| | |||| | | || ||| || || ||||| | |||||| || | Sbjct 3664 GATCTTTGCCTTGA-CGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCT 3606 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || |||||||| Sbjct 3605 TGCCAGTCAGGGTCTTTACGAAGATCTGCAT 3575 >seq105 Length=629 Score = 107 bits (118), Expect = 2e-18 Identities = 146/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598 |||||||||||||||||||||||| |||| | || || | || || || ||||| || Sbjct 577 CGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGAGTTGCTTGCC 518 Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 || || |||| || |||||||| | || | | |||||||| ||| || ||| Sbjct 517 AGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATTTTCGCCTT 458 Query 35659 CAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAG 35717 || |||| | | ||||||| || || ||||||| ||| || ||||| || || | | Sbjct 457 CA-CGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCCTGTGAGCG 399 Query 35718 TTTTCACAAATATCTGCATTC 35738 | || ||||| |||||||||| Sbjct 398 TCTTGACAAAGATCTGCATTC 378 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | || || | || || |||||||| || || || Sbjct 343 CTCCTTCTGGATGTTGTAATCAGAGAGAGTCCGGCCATCCTCGAGCTGCTTTCCAGCGAA 284 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || || || || | |||| || ||||||||| |||||| ||||| | | Sbjct 283 GATGAGACGTTGTTGATCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATT 224 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||| || ||||||| |||||||| || ||||| | ||| || || Sbjct 223 GTCAATAGTGTCGGACGACTCGACCTCCAAGGTGATCGTCTTGCCCGTGAGAGTCTTAAC 164 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 163 GAAGATTTGCAT 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450735284212920