Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1988 120 3e-22 seq105 107 2e-18 seq1347 82.4 8e-11 >seq1988 Length=7662 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | |||||||| || ||| ||||| |||||||||||||| Sbjct 4088 TTCCTCCACGCAGACGAAGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAG 4029 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || |||| | || |||||||| || || ||||| |||||||| ||||| || || | Sbjct 4028 AAAGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAG 3969 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || || || || || ||||| ||| | ||||| || || || | Sbjct 3968 GAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGA 3909 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || || || || || || || || || ||||| || ||||| Sbjct 3908 CTTCGAGGGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| ||||| ||||| |||||||||||||| Sbjct 4882 CCACCACGGAGACGGAGGACAAGGTGGAGCGTACTCTCCTTCTGAATGTTGTAGTCAGAG 4823 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| ||||| || ||||| || || |||| ||||| || ||||| || Sbjct 4822 AGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGAGGG 4763 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| || | |||||||| || ||||| Sbjct 4762 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATGGTGTCGGAAGACTCCACC 4703 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| || || || || ||||| |||||||| Sbjct 4702 TCGAGGGTGATAGTCTTACCCGTCAACGTCTTGACGAAGATTTGCAT 4656 >seq105 Length=629 Score = 107 bits (118), Expect = 2e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| ||||| ||||||||||||||||||||| | || | || ||||| Sbjct 585 AGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGAGT 526 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| || || |||| ||| ||||| ||||| || || ||||| || ||||| ||| Sbjct 525 TGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATT 466 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || || || ||| | |||||||| || || || || | ||||||||||| || Sbjct 465 TTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCCT 406 Query 134688 GTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || || || || || |||||| Sbjct 405 GTGAGCGTCTTGACAAAGATCTGCATT 379 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||||| || || | |||||||| || || || ||||| || |||||||| || Sbjct 380 TTCCTCCTCGAAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAG 321 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || | || |||||||| || || || || || | ||| || ||||| || | Sbjct 320 AGAGAGTCCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCTGGGG 261 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || ||||| || || || || ||| | ||||||||||| || | Sbjct 260 GAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCGA 201 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || || || || || || | ||| |||||||| |||||||| Sbjct 200 CCTCCAAGGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATTTGCAT 152 >seq1347 Length=113524 Score = 82.4 bits (90), Expect = 8e-11 Identities = 169/249 (68%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 8542 TCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCC 8601 || |||||||||||| | ||| ||||| | || ||| | ||||| || |||||||| Sbjct 32602 TCCAACATGCGCCACCGTCCCATTGGCATCGGTGTGAACGGTCTCGCTGACGCGTTCATG 32661 Query 8602 ATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAA 8661 || | || || || | ||| | || ||||| ||||||| | || || Sbjct 32662 ATCCTTCGGCTGCCGTTCGACTCTCCCGAGGCGCGTCACCTCAACAAGCAGATCTTCGAG 32721 Query 8662 ACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCC-CGAGAATTGGGCACGTA 8720 || | ||| ||| || | || |||||| || | |||||| ||| ||| | | || Sbjct 32722 ACTATCTATCACGCTGCTCTCGACGCCAGCAGTGATCTTGCCGAGAGGGATGGTC-CTTA 32780 Query 8721 CGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGT 8780 ||| |||||| ||||| |||| |||| | || || || || |||||||||||| ||| Sbjct 32781 CGAGACGTACGAAGGCAGTCCTGTCAGCAGGGGCATCTTCCAGTACGACATGTGGGGTGT 32840 Query 8781 CACGCCCAC 8789 || || || Sbjct 32841 TACTCCTAC 32849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505333020399480