Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2980 120 4e-22 >seq2980 Length=15283 Score = 120 bits (132), Expect = 4e-22 Identities = 244/359 (68%), Gaps = 5/359 (1%) Strand=Plus/Plus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 || || || || ||| ||| | ||||| |||||||| || | || || || | || Sbjct 11960 AAACAAGCAAAATCAGTATGCAACCCCTCGTCTCTACTGATCAGCTCATTCGAGTACGTC 12019 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 ||||| ||||| || || | |||||| | |||||| || || || ||| | ||||||||| Sbjct 12020 AGTCCTGGCATGAGGCCCCTCTTTTTCAACCAAAAAATCGCCGCGAAACAGCCAGAAAAG 12079 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT-- 39791 || ||||||||||| |||||||| || || || | ||| || | | | | | || Sbjct 12080 AATATGCCTTCTACCGCTGCAAAGGCGACGAGACGTTCTGCGAACGTAGACTGTTGATCT 12139 Query 39792 -GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 39850 ||||||| | ||||| || || ||||||| | ||| || || || || ||||| Sbjct 12140 GATATCCACCGAAGAGCCCACTCGGCCTTCTTCTGGATACAGGGAATAGTCTCGATAGCG 12199 Query 39851 TTAAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATA 39909 | || | || | | | | | || |||| | || ||||| || | || || Sbjct 12200 TCGAATAAGTATTCTCGCTGCTTGAC-GTCTTGGATGTAGGTATCAATGAGGAGGGAGTA 12258 Query 39910 CATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAG 39968 | | |||||||||||||| || ||| || || || ||||| || || | ||||||| Sbjct 12259 CGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCTTCAG 12317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686819939760360