Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq176 154 1e-32 seq2980 134 1e-26 >seq176 Length=24199 Score = 154 bits (170), Expect = 1e-32 Identities = 369/550 (67%), Gaps = 20/550 (4%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||||||||||| ||||| | |||||||| |||||||| ||||| | || || Sbjct 19330 ATCTGGCAAATGTACAAGAAAGCCGAAGCGTCATTCTGGACAGCGGAAGAGATGGACCTG 19389 Query 43790 ACTAAAGACTTAGCAC-ATTGG--ATTGCATTAAAACCACAA-GAAAAACATTTTATATC 43845 | ||||| | |||| | ||| | | | ||| |||| || ||||| || || Sbjct 19390 TCGAAAGATAT-GCACGACTGGCAACACCGGTTGAACGACAACGAGCGCCATTTCATCTC 19448 Query 43846 TTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCG 43905 | ||| | || || || || || ||||| || ||||| || ||| | ||| || Sbjct 19449 TCATGTTCTTGCTTTCTTCGCGGCTTCGGACGGTATTGTCAACGAGAATCTCGTTGAACG 19508 Query 43906 GTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCAT 43965 ||| | | ||||| ||| | | || || || || || ||||| || ||||| || Sbjct 19509 GTTCTCCAACGAAGTCCAAGCAGCTGAGGCCCGCTGCTTCTATGGCTTCCAAATCATGAT 19568 Query 43966 AGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGG-- 44023 || || ||||| || || | ||| || || || ||||||||||||||||| | Sbjct 19569 GGAGAACATTCACTCCGAGACGTATTCCCTCCTCATCGATACGTACATCAAAGACCAGAC 19628 Query 44024 -CACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGC 44082 || | |||||| | || | || || ||||| | ||| || || | || || Sbjct 19629 CCAACGGGAGCATC---TCTTCGACGCCATCGAAACGATTCCTTGCATCAAGAAGAAGGC 19685 Query 44083 AGACTGGGCCCTTAAATGGATAAATTCA---AATGATT---CTTTTGGAGAACGACTTGT 44136 |||||||| | ||||| ||| || | | | || | |||||||| || Sbjct 19686 TGACTGGGCTTTACGCTGGAT---CTCAGACAAGAAGTCCGCGTTCGCCGAACGACTCGT 19742 Query 44137 CGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTT 44196 || ||||| | || ||||| || ||||| || || ||||||||| |||| || ||| | Sbjct 19743 TGCCTTTGCTGCGGTTGAAGGAATCTTCTTCTCGGGCTCGTTTGCGTCCATCTTCTGGCT 19802 Query 44197 AAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGA 44256 ||||| ||||| | |||||||| |||||||| || ||||| | || || || || || Sbjct 19803 CAAGAAGAGAGGTCTCATGCCTGGCTTGACGTTCTCCAATGAACTGATCAGCCGCGACGA 19862 Query 44257 AGGCTTACAT 44266 ||| | ||| Sbjct 19863 GGGCATGCAT 19872 >seq2980 Length=15283 Score = 134 bits (148), Expect = 1e-26 Identities = 375/566 (66%), Gaps = 16/566 (3%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || ||||||||||| || || || | ||||| || ||||| || || || | |||||| Sbjct 13977 ATCTGGCAAATGTATAAGAAGGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATGGATTTG 14036 Query 43790 ACTAAAGACTTAGCACA--TTGGATTGCATTAA-AACCACAA-GAAAAACATTTTATATC 43845 | || ||| | ||| | ||| || ||| |||| ||| || || || || Sbjct 14037 TCGAAGGACCTC-CACGACTGGGACAACAGACTCAACGACAATGAACGTCACTTCATCTC 14095 Query 43846 TTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCG 43905 || | || || |||||||| || || || ||||| || || | || || Sbjct 14096 ACACGTCCTCGCCTTCTTTGCTGCCTCGGATGGTATTGTCAACGAGAACCTCGTCGAGCG 14155 Query 43906 GTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCAT 43965 ||| | | || |||||| | | ||||| || || || || || || ||||| || Sbjct 14156 GTTCTCCAACGAGGTTCAAGCAGCTGAAGCTCGTTGCTTCTACGGCTTCCAAATCATGAT 14215 Query 43966 AGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA---TGG 44022 || || || ||||| || | ||| ||||| || || || |||||||| || | Sbjct 14216 GGAGAACATCCATTCAGAGACATACTCCCTTCTCATCGACACATACATCAAGGACCCTAA 14275 Query 44023 GCA-CGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAG 44081 ||| || || ||| | | || |||| || || || | ||| || || | || | Sbjct 14276 GCAACGCGA-GCACC---TCTTCGATGCTATCGAGACCATTCCTTGCATCAAGAAGAAGG 14331 Query 44082 CAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT---TTTGGAGAACGACTTGTCG 44138 | ||||||||| | ||||| || | ||| || || || ||||||| Sbjct 14332 CTGACTGGGCCTTGCGCTGGATCTCGGACAAGAACTCTGCATTCTCCGAGCGTCTTGTCG 14391 Query 44139 CGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAA 44198 |||| || | || || || || ||||| || || || || || | || |||||||| | Sbjct 14392 CGTTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCTTTCGCATCTATCTTTTGGTTGA 14451 Query 44199 AGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAG 44258 |||| || |||||||||||||| ||||| || || |||||||| || || ||||| || | Sbjct 14452 AGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCGAATGAGTTGATCAGCCGTGACGAGG 14511 Query 44259 GCTTACATTGCGATTTTGCTTGCTTG 44284 || | ||| ||| |||||||||||| Sbjct 14512 GCATGCATACCGACTTTGCTTGCTTG 14537 Score = 123 bits (136), Expect = 2e-23 Identities = 372/568 (65%), Gaps = 20/568 (4%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || ||||||||||| ||||| ||| |||| ||||| |||||||| ||||| | || | Sbjct 12519 ATTTGGCAAATGTATAAAAAGGCAGAGGCTTCATTCTGGACAGCCGAAGAGATCGACCTC 12460 Query 43790 ACTAAAGACTTAGCACATTGGATTGCA--TTAAAACCACAA-GAAAAACATTTTATATCT 43846 | | || | | | | ||| | | ||| | || ||| ||||| || || Sbjct 12459 TCGCACGATCTGGTAGACTGGCACACCCGTCTGAACGATAACGAACGTCATTTCATCTCG 12400 Query 43847 TTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGG 43906 || | || || || |||| ||| ||||| ||||| || || | || || Sbjct 12399 CACGTACTCGCCTTCTTCGCTGGCTCCGATGGGATCGTCAACGAGAACCTCGTCGAACGA 12340 Query 43907 TTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATA 43966 || || | || || || | | ||||| || || || || || || ||||| || Sbjct 12339 TTCTCGAACGAGGTGCAGGCAGCTGAAGCTCGTTGCTTCTACGGCTTCCAAATCATGATG 12280 Query 43967 GAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCAC 44026 || || || ||||| || | |||| || || || ||||| |||||| |||| | Sbjct 12279 GAGAACATCCATTCAGAGACGTACTCCCTCCTCATTGATACCTACATCCAAGA------C 12226 Query 44027 GAGAAGCATCGA------TTGTTTAATGCGATAGAAAC-AGTACCTGCGATTAAACATAA 44079 | ||||| ||| || || | || || || || | | |||| || | | || Sbjct 12225 GTCAAGCAGCGAGAATACTTATTCGACGCTATCGAGACTATTCCCTGT-ATCCAGAAGAA 12167 Query 44080 AGCAGACTGGGCCCTTAAATGGATA--AATTCAAATGATT-CTTTTGGAGAACGACTTGT 44136 || || ||||| ||| |||||| | |||| | | | || | |||||| || || Sbjct 12166 GGCCGAGTGGGCTCTTCGGTGGATATCAGATCAACAGTCTACGTTCGCAGAACGTCTCGT 12107 Query 44137 CGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTT 44196 ||| ||||||| || |||||||| |||||||| || | || ||||| || |||||||| Sbjct 12106 CGCCTTTGCAGCGGTAGAAGGCATATTCTTTTCTGGCTGTTTCGCGGCGATTTTTTGGTT 12047 Query 44197 AAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGA 44256 || || | || | ||||| || |||||| || |||||| | || ||| | || || Sbjct 12046 GAAAAAGAGGGGCCTCATGCCAGGACTGACGTACTCGAATGAGCTGATCAGTAGAGACGA 11987 Query 44257 AGGCTTACATTGCGATTTTGCTTGCTTG 44284 || || ||| ||||||||||| ||| Sbjct 11986 GGGGTTGCATACTGATTTTGCTTGTTTG 11959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397405869495745