Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2980 152 6e-32 seq176 111 2e-19 seq1547 91.5 2e-13 >seq2980 Length=15283 Score = 152 bits (168), Expect = 6e-32 Identities = 366/540 (68%), Gaps = 13/540 (2%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||||||| ||| | |||||||||||| || || ||||| | ||| |||||| Sbjct 14512 CCCTCGTCACGGCTGATCAACTCATTCGAGAAGGTCAAGCCAGGCATCAAACCACGCTTC 14453 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 |||||||| || || | || ||||| ||||||||||| ||||| || |||||| Sbjct 14452 TTCAACCAAAAGATAGATGCGAAAGAGCCGGAGAAGAAGATACCCTCGACGGCGGCGAAC 14393 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACTG 130212 || | |||||||| | || | | | |||| | | ||| || ||||| | Sbjct 14392 GCGACAAGACGCTCGGAGAATG-CAGAGTTCTTGTCCGAGATCCAGCGCAAGGCCCAGTC 14334 Query 130213 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTTCTG 130271 ||||| |||| ||| || || | ||||| ||| || || ||||| | || | || || Sbjct 14333 AGCCTTCTTCTTGATGCAAGGAATGGTCTCGATAGCATCGAAGAGGTGCTCGCGTTGCTT 14274 Query 130272 ATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT-TTCA 130330 | || || |||||||| | || ||||| || ||||| || ||||| | | || Sbjct 14273 A-GGGTCCTTGATGTATGTGTCGATGAGAAGGGAGTATGTCTCTGAATGGATGTTCTCCA 14215 Query 130331 TTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC-GCTTATCTGTACCTCATCTGCAAA 130389 | || | || | ||||||| | || ||||| ||| | || ||||| | || | | Sbjct 14214 TCAT-GATTTGGAAGCCGTAGAAGCAACGAGCTTCAGCTGCT-TGAACCTCGT-TGGAGA 14158 Query 130390 ATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATAT 130448 | | | || ||||| ||||| ||||| || ||||||| || || |||| | Sbjct 14157 ACCGCTCGACGAGGTTCTCGTTGACAATACCATCCGAGGCAGCAAAGAAGGCGAGGACGT 14098 Query 130449 ACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTCGTCAAGATCCTTCG 130505 ||||| | ||||||| ||||| || | | | |||||||| || ||||||| Sbjct 14097 GTGAGATGAAGTGACGTTCATTGTCGTTGAGTCTGTTGTCCCAGTCGTGGAGGTCCTTCG 14038 Query 130506 AGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCTTATAGAGTTCCCAGA 130565 | | ||| | |||||| |||||||| | | || |||||||||||| | || ||||| Sbjct 14037 ACAAATCCATCTCCTCAGCAGTCCAGAAGGACGCTTCAGCCTTCTTATACATTTGCCAGA 13978 Score = 114 bits (126), Expect = 2e-20 Identities = 336/507 (66%), Gaps = 17/507 (3%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| | ||| || ||||||||| | ||| ||||||||||| |||| ||| Sbjct 11984 CCCTCGTCTCTACTGATCAGCTCATTCGAGTACGTCAGTCCTGGCATGAGGCCCCTCTTT 12043 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 |||||||| |||||||| || ||||||| ||||| || || || || || || Sbjct 12044 TTCAACCAAAAAATCGCCGCGAAACAGCCAGAAAAGAATATGCCTTCTACCGCTGCAAAG 12103 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCATCGCCCAC 130210 || | |||||| || || || | |||| | ||| | |||| | |||||| Sbjct 12104 GCGACGAGACGTTCTGCGAACG---TAGACTGTTGATCTGATATCCACCGAAGAGCCCAC 12160 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 130270 | ||||| |||| |||||| || | |||| ||| || || || | | ||| | || Sbjct 12161 TCGGCCTTCTTCTGGATACAGGGAATAGTCTCGATAGCGTCGAATAAGT-ATTC-TCGCT 12218 Query 130271 GATGGA--TCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT-T 130327 | | || |||| |||||| |||| ||||| || || || || ||||| | | Sbjct 12219 GCTTGACGTCTTGGATGTAGGTATCAATGAGGAGGGAGTACGTCTCTGAATGGATGTTCT 12278 Query 130328 TCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCA 130387 ||| || | || | ||||||| | || ||||| | ||| ||||| | | | Sbjct 12279 CCATCAT-GATTTGGAAGCCGTAGAAGCAACGAGCTTCAGCTGCCTGCACCTCGT-TCGA 12336 Query 130388 AAATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGAT 130446 ||| ||| || ||||| || || |||||||| ||||| || || || || | Sbjct 12337 GAATCGTTCGACGAGGTTCTCGTTGACGATCCCATCGGAGCCAGCGAAGAAGGCGAGTAC 12396 Query 130447 ATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTT 130503 | | ||||| | |||| || ||||||| |||| | |||||| | ||||| | Sbjct 12397 GTGCGAGATGAAATGACGTTCGTTATCGTTCAGACGGGTGTGCCAGTCTACCAGATCGTG 12456 Query 130504 CGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||| || | ||| || || ||||| Sbjct 12457 CGAGAGGTCGATCTCTTCGGCTGTCCA 12483 >seq176 Length=24199 Score = 111 bits (122), Expect = 2e-19 Identities = 336/506 (66%), Gaps = 15/506 (3%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| ||| ||| |||||||| ||||| || || ||||||||||| | |||| Sbjct 19865 CCCTCGTCGCGGCTGATCAGTTCATTGGAGAACGTCAAGCCAGGCATGAGACCTCTCTTC 19806 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || | ||| ||||| ||||||||||| || || || || || Sbjct 19805 TTGAGCCAGAAGATGGACGCAAACGAGCCCGAGAAGAAGATTCCTTCAACCGCAGCAAAG 19746 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGTATCA-AACCACTTCATCGCCCAC 130210 |||| ||| || || || || | ||||| |||| | | | ||| | ||||| Sbjct 19745 GCAACGAGTCGTTCGGCGAACG---CGGACTTCTTGTCTGAGATCCAGCGTAAAGCCCAG 19689 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 130270 | ||||| |||| ||| || || | || | ||| || || ||||| | || | || Sbjct 19688 TCAGCCTTCTTCTTGATGCAAGGAATCGTTTCGATGGCGTCGAAGAGATGCTCCCGTTGG 19629 Query 130271 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT-TTC 130329 | | |||||||||||| |||| ||||| ||||| || ||| || | | | | Sbjct 19628 GTCTGGTCTTTGATGTACGTATCGATGAGGAGGGAATACGTCTCGGAGTGAATGTTCTCC 19569 Query 130330 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC-GCTTATCTGTACCTCATCTGCAA 130388 || || | || | | ||||| |||| || || ||| | || || || | || | Sbjct 19568 ATCAT-GATTTGGAAGCCATAGAAGCAGCGGGCCTCAGCTGCT-TGGACTTCGT-TGGAG 19512 Query 130389 AATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATA 130447 || ||| | || |||||| ||||| || || || | || || || || || | | Sbjct 19511 AACCGTTCAACGAGATTCTCGTTGACAATACCGTCCGAAGCCGCGAAGAAAGCAAGAACA 19452 Query 130448 TACTTTATGAATTTCTGTTCATTCTCGTTCA--GGGTCTT-CCAGTCGTCAAGATCCTTC 130504 | ||||| | | || || ||||||| ||| || |||||||| | ||| ||| Sbjct 19451 TGAGAGATGAAATGGCGCTCGTTGTCGTTCAACCGGTGTTGCCAGTCGTGCATATCTTTC 19392 Query 130505 GAGAGATCTACCTCCTCCGCAGTCCA 130530 || || || | ||| ||||| ||||| Sbjct 19391 GACAGGTCCATCTCTTCCGCTGTCCA 19366 >seq1547 Length=32498 Score = 91.5 bits (100), Expect = 2e-13 Identities = 220/326 (67%), Gaps = 19/326 (6%) Strand=Plus/Plus Query 14153 AAGCCATCCATCTCAGTCAAG-AGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGG 14211 || || |||||||| |||| || || |||| ||||| ||||| || ||||| | Sbjct 25948 AAACCGTCCATCTCCA-CAAGCAGCTGGTTGAGCGTTTGCTCGCGCTCGTCATTGCCCCC 26006 Query 14212 CATACCACCC---GCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGAT 14268 | ||| | | ||||| || | ||| |||| ||| || ||||| |||||||| | ||| Sbjct 26007 GAAACCGCTCTTCGCACTACGCTTCTTCCCGATGGCATCGATTTCGTCGATGAAGATGAT 26066 Query 14269 ACATGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACAC 14327 || || || ||| || | | | || | ||| ||||||| | || |||||||| Sbjct 26067 GCACGGCGCGTTCTTCTTGGCCGAAG-CGAACAGATCCCGCACTCGCGAGGAACCGACAC 26125 Query 14328 CCACAAACATCTCCACAAAAT-TG-----GCGGCGGAACATTGGATGAAGGGGACGTTAG 14381 | ||||||||||| || || | || | | ||||| | ||| || ||||| | Sbjct 26126 CAACAAACATCTCGACGAATTCTGAACCAGAGACGGAA------AGGAAAGGTACGTTGG 26179 Query 14382 ATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAA 14441 |||||| || | ||| || || | ||| || || || || || || | ||||| Sbjct 26180 CTTCACCTGCTGTCGCTTTCGCCAGCAAGGTTTTACCGGTACCGGGAGGACCAGAGAGAA 26239 Query 14442 GGGCACCACGTGGGATCCTGGCACCA 14467 ||||| ||||| ||| |||||||| Sbjct 26240 TAGCACCTCGTGGAATCTTGGCACCA 26265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618355197676440