Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq176 111 2e-19 seq1547 95.1 1e-14 >seq176 Length=24199 Score = 111 bits (122), Expect = 2e-19 Identities = 169/234 (72%), Gaps = 10/234 (4%) Strand=Plus/Plus Query 94709 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTA 94768 |||| ||||| || |||||| |||| |||| || || | ||||| || || |||||| Sbjct 19637 AGCATCTCTTCGACGCCATCGAAACGATTCCTTGCATCAAGAAGAAGGCTGACTGGGCTT 19696 Query 94769 TGAAGTGGTT-TGATACAA--AGTC-GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCG 94824 | ||| | | | |||| |||| |||||| || || |||||| | || ||||| Sbjct 19697 TACGCTGGATCTCAGACAAGAAGTCCGCGTTC----GCCGAACGACTCGTTGCCTTTGCT 19752 Query 94825 TGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCG 94883 ||||| || ||||||||||| || || || |||| | || | |||||||||||| | Sbjct 19753 GCGGTTGAAGGAATCTTCTTCTCGGGCTCGTT-TGCGTCCATCTTCTGGCTCAAGAAGAG 19811 Query 94884 AGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 |||||||||||| || | |||||||| || || ||| || |||||||| Sbjct 19812 AGGTCTCATGCCTGGCTTGACGTTCTCCAATGAACTGATCAGCCGCGACGAGGG 19865 >seq1547 Length=32498 Score = 95.1 bits (104), Expect = 1e-14 Identities = 218/322 (68%), Gaps = 11/322 (3%) Strand=Plus/Plus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 ||||| |||||||| | || ||||| | ||||| || || || ||||| | Sbjct 25948 AAACCGTCCATCTCCACAAGCAGCTGGTTGAGCGTTTGCTCGCGCTCGTCATTGCCCCCG 26007 Query 9674 ATACCACCA---GCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 9730 | ||| | ||||| || | ||| || | |||||| || || || ||||||| |||| Sbjct 26008 AAACCGCTCTTCGCACTACGCTTCTTCCCGATGGCATCGATTTCGTCGATGAAGATGATG 26067 Query 9731 CATGGTTGATT-TTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 9789 || || || ||| | ||| | || |||||||| || ||| || || ||||| Sbjct 26068 CACGGCGCGTTCTTCTTGGCCGAAG-CGAACAGATCCCGCACTCGCGAGGAACCGACACC 26126 Query 9790 AACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGAT--GAAGGGGACATTAGATTC 9846 |||||||||||| || || | || | || || ||| ||| || || || | ||| Sbjct 26127 AACAAACATCTCGACGAATTCTGAACCAGAGAC---GGAAAGGAAAGGTACGTTGGCTTC 26183 Query 9847 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9906 ||| || | ||| || || | || ||||| ||||| || ||| | ||| | || Sbjct 26184 ACCTGCTGTCGCTTTCGCCAGCAAGGTTTTACCGGTACCGGGAGGACCAGAGAGAATAGC 26243 Query 9907 ACCTCGTGGAATCTTGGCGCCA 9928 |||||||||||||||||| ||| Sbjct 26244 ACCTCGTGGAATCTTGGCACCA 26265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583185347924760