Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1988 147 7e-30 seq105 143 8e-29 seq2564 105 2e-17 seq3075 84.2 7e-11 >seq1988 Length=7662 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | ||||| || ||||| || ||| || ||||| || || || Sbjct 4090 CATTCCTCCACGCAGACGAAGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTC 4031 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || |||||||||||||| | ||||||||| ||||| Sbjct 4030 AGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGG 3971 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || ||||| || ||||| || |||| ||||| | || Sbjct 3970 AGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTC 3911 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || | ||||| || || | || || || || |||||||| Sbjct 3910 GACTTCGAGGGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 Score = 145 bits (160), Expect = 2e-29 Identities = 157/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || |||||||| || || ||||| ||||| || | || || ||||| |||| Sbjct 4577 CAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAA 4518 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 |||| || || |||||||| |||||||| || ||||||||||| || || || || |||| Sbjct 4517 GTTGCTTACCGGCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAA 4458 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || ||||| || || | |||||| | || || || || || | ||||| | Sbjct 4457 TCTTTGCCTTAACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGC 4398 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| | || || || || |||||||| Sbjct 4397 CGGTCAAAGTCTTCACGAAGATCTGCAT 4370 Score = 129 bits (142), Expect = 2e-24 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 140518 GTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTC 140577 |||||| || |||| || || ||| ||| || || || || ||||| || | || | Sbjct 4307 GTAATCACTGACCAAGGTGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGC 4248 Query 140578 GCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTT 140637 | ||||| ||||| || || ||||| ||||| ||||| ||||| || || ||||| || | Sbjct 4247 GACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCT 4188 Query 140638 CTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTG 140697 | || ||||| || || || || || || || |||| ||||| | || || ||||| | Sbjct 4187 CCTTGTCCTGGATCTTTGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAG 4128 Query 140698 TAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | | ||||||||||| | || || || || ||||||||| Sbjct 4127 TGATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCATT 4087 >seq105 Length=629 Score = 143 bits (158), Expect = 8e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| ||||| ||| ||| |||||||| || || || || | ||| || |||||||| | Sbjct 587 CAAGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGA 528 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 |||| || ||||| ||||| ||||||||||| || || || |||||||| || || || | Sbjct 527 GTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGA 468 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 |||| || || || || ||||||| || || | || || || | |||| || || | Sbjct 467 TTTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCC 408 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || ||||| ||||||||| Sbjct 407 CTGTGAGCGTCTTGACAAAGATCTGCATT 379 >seq2564 Length=21041 Score = 105 bits (116), Expect = 2e-17 Identities = 262/395 (66%), Gaps = 2/395 (1%) Strand=Plus/Minus Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590 ||||||||| || || ||||||| | || |||||||| | || ||| | || | Sbjct 16473 ACCCGAAGAGATCTCGGCAATGGTCCTCACCAAGATGAAGGAGACCGCCGAATCTTACCT 16414 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || | | || || | || || || || || || || || || || ||| | || || Sbjct 16413 CGGCGCTCCCGTCACGCAAGCCGTCATCACGGTCCCTGCGTACTTCAACGATTCGCAACG 16354 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 | || || || || ||||| | ||| | || | || || || | || || || || Sbjct 16353 TCAAGCCACCAAGGACGCTGGTACCATCTCCGGTCTCAACGTCCTCCGTATCATCAACGA 16294 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA-GaaaaaaaTA 349769 || || ||||| || || || || || ||||| || | | | || || || Sbjct 16293 GCCTACCGCTGCCGCCATCGCCTACGGTCTTGACAAGAAG-GCCACTGGTGAGCGGAACG 16235 Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 | || || || ||| | ||||| ||||| || ||||| || || | || | || |||| Sbjct 16234 TCCTCATCTTCGATCTCGGTGGAGGTACCTTCGATGTCTCCCTCTTGACCATCGAGGAGG 16175 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | || || || || || || || ||||||||||| || |||||||| || || || || | Sbjct 16174 GTATCTTCGAGGTCAAGGCTACCGCTGGTGATACTCACCTTGGTGGTGAGGACTTCGACA 16115 Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAG 349924 | |||||||| || || || ||||||| ||| Sbjct 16114 ACCGTCTCGTCAACCACTTCGTCCAAGAATTCAAG 16080 Score = 102 bits (112), Expect = 2e-16 Identities = 135/186 (73%), Gaps = 1/186 (1%) Strand=Plus/Minus Query 349231 TTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAG 349290 ||| |||| ||| ||||||||||| ||||| ||||| |||||||| || || |||||| | Sbjct 16831 TTGCGTTGGTGTCTGGCAAAATGACCGTGTCGAAATCATTGCAAACGACCAGGGTAACCG 16772 Query 349291 AACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAA 349350 ||||| || |||||||| || || | ||| | ||| | |||| |||||| | || || Sbjct 16771 GACAACCCCCTCATACGTCGCCTTCAGCGACAACGAGAGGTTGATCGGTGATGCCGCCAA 16712 Query 349351 AAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAG 349410 || || | || || || | || || || || || || ||||| || || ||| | Sbjct 16711 GAACCAGGTCGCAATGAACCCTCACAACACTGTCTTCGACGCCAAGCGTCTCATCGGTCG 16652 Query 349411 -AAGTT 349415 ||||| Sbjct 16651 CAAGTT 16646 >seq3075 Length=12210 Score = 84.2 bits (92), Expect = 7e-11 Identities = 177/264 (67%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 349634 TTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTT 349693 || || || || || ||| || || || || || || | ||| || || | | || Sbjct 9235 TTCAACGACGCTCAACGTCAGGCCACCAAGGACGCCGGTACCATCGCCGGTCTCACCGTC 9294 Query 349694 CTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGT 349753 || | || || || || ||||| ||||| || ||||| || || ||||| || | || Sbjct 9295 CTCCGTATCATCAACGAGCCCACGGCTGCCGCTATTGCGTACGGTCTTGACAAGAAGAAG 9354 Query 349754 GACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTA 349813 || ||| | || || | | || | |||||||||||||| ||||| || || Sbjct 9355 GAGGGTGAATCCCAAATCATTGTCTACGACCTGGGTGGTGGTACTTTCGATGTCTCCCTC 9414 Query 349814 CTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGT 349873 || | | || || || | ||||| || || ||||| ||||| || || |||||| Sbjct 9415 CTCTCTATCGATGACGGCGTCTTTGAGGTCTTGGCTACTGCCGGTGACACTCACCTTGGT 9474 Query 349874 GGAGAAGATTTTGATAATCGTCTC 349897 || |||||||| ||||| ||| || Sbjct 9475 GGTGAAGATTTCGATAACCGTGTC 9498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515053482475247