Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2980 154 2e-32 seq2317 93.3 5e-14 seq1170 89.7 6e-13 >seq2980 Length=15283 Score = 154 bits (170), Expect = 2e-32 Identities = 352/524 (67%), Gaps = 12/524 (2%) Strand=Plus/Minus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| || |||| ||| || || | ||| ||||| |||||||| || | | |||| Sbjct 14530 GCAAAGTCGGTATGCATGCCCTCGTCACGGCTGATCAACTCATTCGAGAAGGTCAAGCCA 14471 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| | ||||||||||||||||||||||| | ||| || || ||||||||| Sbjct 14470 GGCATCAAACCACGCTTCTTCAACCAAAAGATAGATGCGAAAGAGCCGGAGAAGAAGATA 14411 Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACG----GTGCATCGGAAGTCAT 74926 || ||||| || || |||||||| || | | ||| | || | | | | || Sbjct 14410 CCCTCGACGGCGGCGAACGCGACAAGACGCTCGGAGAATGCAGAGTTC-TTGTCCGAGAT 14352 Query 74927 CCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAA 74986 ||| | ||||| ||||| || |||| ||| | || ||||| || | ||| Sbjct 14351 CCAGCGCAAGGCCCAGTCAGCCTTCTTCTTGATGCAAGGAATGGTCTCGATAGCATCGAA 14292 Query 74987 GAG--GCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTC 75044 ||| ||| || || ||| ||| ||||||| | |||| || | ||| ||||| ||| Sbjct 14291 GAGGTGCTCGCGTT-GCTTAGGG-TCCTTGATGTATGTGTCGATGAGAAGGGAGTATGTC 14234 Query 75045 TCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATC 75104 || ||||| || ||| | | ||| | ||||||| | || || || || Sbjct 14233 TCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCTTCAGCTGCT 14174 Query 75105 TGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCG 75164 || || || || || || | | ||| ||||| |||| || || |||||||| || Sbjct 14173 TGAACCTCGTTGGAGAACCGCTCGACGAGGTTCTCGTTGACAATACCATCCGAGGCAGCA 14114 Query 75165 AAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGTCCCAA 75221 || || || || || | ||| ||||| || |||| ||| ||||| |||||||| Sbjct 14113 AAGAAGGCGAGGACGTGTGAGATGAAGTGACGTTCATTGTCGTTGAGTCTGTTGTCCCAG 14054 Query 75222 TCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 || | |||||| || |||||| |||||||| | |||||||| Sbjct 14053 TCGTGGAGGTCCTTCGACAAATCCATCTCCTCAGCAGTCCAGAA 14010 Score = 93.3 bits (102), Expect = 5e-14 Identities = 288/439 (66%), Gaps = 19/439 (4%) Strand=Plus/Plus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| || |||| | || || ||||| || |||| |||||||| ||| || || Sbjct 11966 GCAAAATCAGTATGCAACCCCTCGTCTCTACTGATCAGCTCATTCGAGTACGTCAGTCCT 12025 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| || || | ||| ||||||||||| || || ||| | ||| ||||| ||| Sbjct 12026 GGCATGAGGCCCCTCTTTTTCAACCAAAAAATCGCCGCGAAACAGCCAGAAAAGAATATG 12085 Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACG------GTGCATCGGAAGTC 74924 ||||| || ||||||||||| || |||| ||||||| || ||| || Sbjct 12086 CCTTCTACCGCTGCAAAGGCGACGAGACGTTCTGCGAACGTAGACTGTTGATCTGA---T 12142 Query 74925 ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGCTTG 74983 ||||| ||||||| || || ||| | || ||||| | ||| ||||| || | Sbjct 12143 ATCCACCGAAGAGCCCACTCGGC-CTTCTTCTGGATACAGGGAATAGTCTCGATAGCGTC 12201 Query 74984 GAAGAGGCTTGCCTTCTCTTCGGGA--TCCTTGACGAGCTTGTCAATCATAAGTGAGTAC 75041 ||| | | | | || || | || || | || | | ||||| | || |||||| Sbjct 12202 GAATAAGTATTC--TCGCTGCTTGACGTCTTGGATGTAGGTATCAATGAGGAGGGAGTAC 12259 Query 75042 GTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101 ||||| ||||| || ||| | | ||| | ||||||| | || || || || Sbjct 12260 GTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCTTCAGCT 12319 Query 75102 ATCTGTACATCCTTTGAAAA--ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGG 75159 ||| || || || || || ||| | ||| ||||| ||||||| || || ||| Sbjct 12320 GCCTGCACCTCGTTCGAGAATCGTTC--GACGAGGTTCTCGTTGACGATCCCATCGGAGC 12377 Query 75160 CGGCGAAAAAAGCCAGTAC 75178 | ||||| || || ||||| Sbjct 12378 CAGCGAAGAAGGCGAGTAC 12396 >seq2317 Length=22799 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 119083 GTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCCTCGTCGTT 119142 ||||| |||||||||||||||||||| ||||||||||| | || ||| ||||||| Sbjct 8670 GTTGGTCAGCTTGGCACCGTATCCGTTACGACCACCGGTGAGCTTCTTCTCGTCGTCGTC 8729 Query 119143 GTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGA 119186 |||||||||| | | ||||| || |||||||| ||||||| Sbjct 8730 GTAGTTGGAGGATGATAGGAGGTGTCCGAAGATGAGTTCGGGGA 8773 Score = 82.4 bits (90), Expect = 8e-11 Identities = 174/257 (68%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 118045 ATCGGTCATGATCATCAGGCGGCCGTACCGTAAATCTCTCAGGGAGTTATAAACCTTACC 118104 ||| ||||||||||| | |||| ||||| | | | || ||||| |||| Sbjct 7433 ATCAGTCATGATCATGATCTGGCCATACCGCAGAGTGCCCACATCCTTATATTCCTTGTT 7492 Query 118105 ATGTTGGAGCCCGAGGATCTTTTTAAGGTTGGAAAATTCCTCATTTTCCGTCACCTGTTT 118164 |||||| | |||||| ||||| || | || || ||||| || | | | | ||| | Sbjct 7493 ATGTTGCAACCCGAGAATCTTCTTCAAATTCTGAATCTCCTCGTTCTTCATGATCTG-GT 7551 Query 118165 TATG-GTGGCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGAAACACGCCAAACTTGT 118223 ||| | ||||| || |||||| || ||| || |||| || || ||||| | || | Sbjct 7552 CATGCTTCGCGTCACGGACGTTGAGCAACTTTCCTCGCAAGGGGAAGACGCCGTAGTTAT 7611 Query 118224 CACGGCCCACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAA 118283 |||| || ||||| |||| || || | || || | || || |||||||| || || | Sbjct 7612 CACGTCCGACAACACTCAGACCTGCGACCGCCAGTGATTTGGCAGAGTCACCTTCTGTCA 7671 Query 118284 TAATAAGAGTGCACTCG 118300 |||||||| || ||| Sbjct 7672 GGATAAGAGTACAGTCG 7688 >seq1170 Length=3698 Score = 89.7 bits (98), Expect = 6e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 158939 CAATAAACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGG 158998 ||| ||||||||| | |||||||||||| || || | ||||||||||||||| || Sbjct 2439 CAACAAACTCGCGTACAGGGTGCGTCTCTCCGGTGGCGAGAACAAAGTCCTCTGGATGGG 2380 Query 158999 GCTGTTGGAGCATGAGCCACATGGCCTCGACGTAATC 159035 | ||||| ||||| | ||||||| |||||||||| || Sbjct 2379 GTTGTTGCAGCATCAACCACATGCCCTCGACGTAGTC 2343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547145210770200