Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1988 165 9e-36 seq105 159 4e-34 seq1347 120 3e-22 seq2980 100 3e-16 seq4155 89.7 6e-13 seq3402 84.2 2e-11 seq2317 84.2 2e-11 >seq1988 Length=7662 Score = 165 bits (182), Expect = 9e-36 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | ||||||||||| || || || ||||| ||||| | Sbjct 4370 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAGACCATCACCCTGGAGGTCGAGTCTTCT 4429 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||||| || ||||| ||||||||||| |||||||| ||||| Sbjct 4430 GATACCATCGACAATGTTAAGGCAAAGATTCAAGACAAGGAGGGCATTCCTCCTGACCAA 4489 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || ||||| ||||||||||| ||||||| || ||||| | || || ||| Sbjct 4490 CAACGTCTCATCTTTGCCGGTAAGCAACTTGAGGATGGCCGCACCCTGTCGGATTACAAT 4549 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || || || || || Sbjct 4550 ATCCAGAAGGAGTCTACCCTCCACCT 4575 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||| | || |||||||| || || || || || ||||| | Sbjct 3860 ATGCAGATCTTCGTCAAGACGTTGACGGGCAAGACGATCACCCTCGAAGTCGAGTCCTCT 3919 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | |||||||| || |||||||||||||| |||||||| |||||| Sbjct 3920 GACACGATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 3979 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || |||||||| ||||| |||||||||| || ||||| | ||||| || Sbjct 3980 CAACGTTTGATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGACTACAAC 4039 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || ||||| ||| ||||| || || | ||||| || || ||| Sbjct 4040 ATTCAGAAGGAGAGCACCCTTCACCTCGTTCTTCGTCTGCGTGGAGGA 4087 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||||||| | || || |||||||| || || ||||| ||||| Sbjct 4656 ATGCAAATCTTCGTCAAGACGTTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 4715 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || ||||||||||||||||| || ||||| ||||| Sbjct 4716 GACACCATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAA 4775 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| |||||||||||||| | |||||| || | ||||| || Sbjct 4776 CAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGTCGTACTCTCTCTGACTACAAC 4835 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || ||| | ||||| || ||||| Sbjct 4836 ATTCAGAAGGAGAGTACGCTCCACCTTGTCCTCCGTCTCCGTGGTGG 4882 Score = 158 bits (174), Expect = 1e-33 Identities = 150/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| | ||||| ||||| || ||||||||||| ||||| Sbjct 4087 AATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCGTC 4146 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | || | ||||| || || |||||||||||||| ||||| |||||||| Sbjct 4147 TGACACGATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCGCCAGACCA 4206 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || ||||| ||||| || ||||||| ||| ||||| | || || || Sbjct 4207 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTCTCCGATTACAA 4266 Query 27585 TGTCCAAAAGGA 27596 |||| ||||| Sbjct 4267 CATCCAGAAGGA 4278 Score = 141 bits (156), Expect = 1e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || || || ||||| ||||| Sbjct 3575 ATGCAGATCTTCGTAAAGACCCTGACTGGCAAGACCATCACGCTCGAGGTCGAGTCCTCC 3634 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | ||||| || || || ||||||||||| ||||| || |||||| Sbjct 3635 GATACCATTGACAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATTCCACCCGACCAG 3694 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| ||||| |||| || || || | || || ||| Sbjct 3695 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTCTCGGATTACAAT 3754 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| ||| || ||||| Sbjct 3755 ATCCAGAAGGAGAGCACCCTCCATCT 3780 >seq105 Length=629 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || || |||||||| || || | ||||| ||||| Sbjct 152 ATGCAAATCTTCGTTAAGACTCTCACGGGCAAGACGATCACCTTGGAGGTCGAGTCGTCC 211 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| ||||||| || || || ||||||||||| ||||| ||||| || Sbjct 212 GACACTATTGACAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCAGATCAA 271 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || ||||| ||||| |||||||||| || || || | || || || Sbjct 272 CAACGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACTCTCTCTGATTACAAC 331 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || || ||||| || ||| | |||||||| || ||| Sbjct 332 ATCCAGAAGGAGTCTACCCTTCACCTCGTCCTTCGTCTTCGAGGAGGA 379 Score = 149 bits (164), Expect = 7e-31 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||||||||||||||| || || || || ||||| | ||||| ||||| Sbjct 379 AATGCAGATCTTTGTCAAGACGCTCACAGGGAAAACCATTACGTTGGAGGTCGAGTCTTC 438 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || ||||||| ||||| || |||||||| ||||| || || ||||| Sbjct 439 CGACACGATTGACAACGTGAAGGCGAAAATCCAAGACAAGGAAGGAATCCCACCCGACCA 498 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||||| || || ||||| ||||||||||| |||| ||||| || | ||||| || Sbjct 499 GCAACGTCTGATCTTCGCTGGCAAGCAACTCGAAGATGGACGTACACTCTCCGACTACAA 558 Query 27585 TGTCCAAAAGGA 27596 | |||||||| Sbjct 559 CATTCAAAAGGA 570 >seq1347 Length=113524 Score = 120 bits (132), Expect = 3e-22 Identities = 228/333 (68%), Gaps = 2/333 (1%) Strand=Plus/Minus Query 80538 ACCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCC-GGAGACCCCGCGAACGTCTCGT 80596 |||||||||||||| ||| ||||||||| | | | | ||| || || ||||||||| Sbjct 32838 ACCCCACATGTCGTACTGGAAGATGCCC-CTGCTGACAGGACTGCCTTCGTACGTCTCGT 32780 Query 80597 ACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACT 80656 | || || ||| ||| ||| || |||| | || || |||||||| || || Sbjct 32779 AAGGACCATCCCTCTCGGCAAGATCACTGCTGGCGTCGAGAGCAGCGTGATAGATAGTCT 32720 Query 80657 CAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCA 80716 | |||| |||||| | ||||||| || |||||||| || | | |||| Sbjct 32719 CGAAGATCTGCTTGTTGAGGTGACGCGCCTCGGGAGAGTCGAACGGCAGCCGAAGGATCA 32660 Query 80717 TGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATC 80776 ||||| ||||||| || || | || |||||| | || || ||||||||| |||| || | Sbjct 32659 TGAACGCGTCAGCGAGACCGTTCACACCGATGCCAATGGGACGGTGGCGCATGTTGGAAC 32600 Query 80777 GCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836 | ||||| ||||||||||| |||| | || |||| ||||| |||| || || Sbjct 32599 GACGAGCCTCGGGAATTGGGTAGTAGTTGATGTCAATGATCTTGTTCAAGTTGTATGCAA 32540 Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGT 80869 | ||| | || || || || |||| |||| Sbjct 32539 CGACCTTGGCGACGTCGTGGAGCTTCTTGAAGT 32507 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 81541 TTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTT 81600 |||| ||| || || || ||||| || || | |||||| | || ||| || | Sbjct 31646 TTCAGGGTATCGTAGATACCCTCAATTGAGTCATCCTTCATGCAGACCAGGAAGCA---T 31590 Query 81601 GA---CATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAA 81657 || || ||||||| | || |||||||||||||| || || | |||||| ||||| Sbjct 31589 GAGCTCAACTGAGGGTTGGGTGTGCCGGCATTGAACAAGGTCGGAGATGCGTGAGTGAAA 31530 Query 81658 TAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATA 81717 || || | ||||||| | || || || | |||| ||| || |||| || || Sbjct 31529 TACCGCTCAGACATCAAATTGTATGTCTCAATCGCGCGGTCAATGTCAGCACCATGGATT 31470 Query 81718 CCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755 |||| |||||| ||||| | || || ||||||| |||| Sbjct 31469 CCGACAGCTACTCGCATCAGCAGGTGCTGGGGCCTCTC 31432 >seq2980 Length=15283 Score = 100 bits (110), Expect = 3e-16 Identities = 152/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 64636 GCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGTGGATGA-- 64693 ||||| |||||| | ||| | | || ||||| || ||||| | |||||||| Sbjct 12198 GCTATCGAGACTATTCCCTGTATCCAGAAGAAGGCCGAGTGGGCTCTTCGGTGGATATCA 12139 Query 64694 -ATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTC 64752 ||| ||| |||| | | ||||||| || ||||| || ||||| || ||| Sbjct 12138 GATCAACAGTCTACGTTCGCAGAACGTCTCGTCGCCTTTGCAGCGGTAGAAGGCATATTC 12079 Query 64753 TTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTG 64812 |||||||| | ||| | ||||| ||| | |||||| ||||||| |||||||| ||| Sbjct 12078 TTTTCTGGCTGTTTCGCGGCGATTTTTTGGTTGAAAAAGAGGGGCCTCATGCCAGGACTG 12019 Query 64813 TCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGG 64848 ||| ||||| ||||||||| | | ||||||||| Sbjct 12018 ACGTACTCGAATGAGCTGATCAGTAGAGACGAGGGG 11983 >seq4155 Length=6849 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| ||||| || ||||| || ||||| ||||||||||| Sbjct 359 ATGCAGATCTTCGTTAAGACTCTTACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCG 300 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||||| ||| | ||||| || ||||| ||||||||||| Sbjct 299 GACACCATTGACAATGTCAAGGCCAAGATTCAAGACAAGGAGGG 256 >seq3402 Length=1793 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || || ||||||||||| || || || || || ||||| |||||||||| ||| || Sbjct 1501 ATCCCCCCCGACCAGCAGCGACTGATCTTCGCGGGCAAGCAGCTCGAGGATGGTCGCACT 1442 Query 27571 CT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629 || ||| || || || |||||||||| || || ||||| | ||| | ||||| || || Sbjct 1441 CTCAGC-GATTACAACATCCAAAAGGAGTCGACCCTTCACTTGGTCCTCCGTCTCCGTGG 1383 Query 27630 TGG 27632 ||| Sbjct 1382 TGG 1380 >seq2317 Length=22799 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 30328 GGAATTCCCATTAAGAAACACCCTACCGAAAAAATCTGGATCCCCGAACTCATTTTTGGG 30387 || || |||||| ||| |||| | || || |||| ||||||||||||| || || Sbjct 8813 GGTATACCCATTGAGATCCACCAAAAGGAGAAGATCTACGTCCCCGAACTCATCTTCGGA 8754 Query 30388 CACCTTTTGACAAGCTCCAACTACAACGACGAGGAGCAGCGCGTGACGGGTGGACGAAAT 30447 ||||| | || |||||||||| ||||||| ||| || | || ||||| || || Sbjct 8753 CACCTCCTATCATCCTCCAACTACGACGACGACGAGAAGAAGCTCACCGGTGGTCGTAAC 8694 Query 30448 GGCTACGGTGCAAAGCTCGCCAAC 30471 || |||||||| ||||| ||||| Sbjct 8693 GGATACGGTGCCAAGCTGACCAAC 8670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570236623220880