Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_028248.1 Length=136896 Score E Sequences producing significant alignments: (Bits) Value seq7972 201 1e-46 >seq7972 Length=7339 Score = 201 bits (222), Expect = 1e-46 Identities = 416/616 (68%), Gaps = 5/616 (1%) Strand=Plus/Minus Query 30408 ATAATGGTCATCCGGGTTTAATAGGTATTTGTTATATCCTGTATCATACCCTTTAGGTAT 30467 ||||||||| ||| | |||| ||||| ||||||||| | | ||||| || | ||||| Sbjct 7050 ATAATGGTCTTCCTGATTTATCAGGTACTTGTTATATGCAGGGTCATATCCCCTTGGTAT 6991 Query 30468 ATAGATTTTGTTAAGCGGTTTCTGGGTGCGATCTTTTGCATATACAAGCAAAAAGTTTGC 30527 | || || || | || ||| | | || ||||| || | || | |||| || Sbjct 6990 CCATATCTTTTTGATTGGCTTCCTGCTCTTATTCTTTGCGTAAATCAGTATGTAGTTAGC 6931 Query 30528 TGTGGAGAAAACTGTGGCTCCTGTTGCCTTAAATCCTGAAGGGGAATTTGTGGTCATCGA 30587 || || ||||| || || || || ||||| || || || ||| ||||||||||| || Sbjct 6930 GGTAGAAAAAACGGTTGCCCCGGTAGCCTTGAAGCCGGAGGGGTCATTTGTGGTCAGCGT 6871 Query 30588 TATAGTATTTAACTGATTTGCA-CGACCAAAAATCTCGTCCATCAAAACTTTTAAATACG 30646 || || || | | | |||| || ||||| | ||| || | | ||| || |||| | Sbjct 6870 GATCGTGTTGCAAT-AGTTGCTGCGCCCAAACACCTCATCAAGTAGAACCTTGCAATATG 6812 Query 30647 CCATTTCGCAATCATCTAAGTGAACGAATATTACCCCATCATCACTTAGAAGATTACGAA 30706 |||| || ||||||| | ||||| | ||||||||| || | || || | || Sbjct 6811 CCATCTCTGAATCATCGAGATGAACCGCCAATACCCCATCCTCTCCAAGGAGTCTTTTAA 6752 Query 30707 TTATTTCTAACCTATCCCTCATTAAGCCCAGCCAAATGGAATGCTCCAGGCTATCATCGT 30766 |||||| || | ||| | ||||| || |||||||| |||||||| | | ||||| | Sbjct 6751 ATATTTCAAAGCGATCTCGCATTAGTCCGAGCCAAATCGAATGCTCGACACCGTCATCAT 6692 Query 30767 AATGCTCAAAAGCCCTCCCGGTATTGAATGGTGGGTCTATGTAAACACACTTCACTTTGC 30826 ||||||| || || ||||| || || || || ||||| || || | ||||| | | | Sbjct 6691 AATGCTCGAACGCACTCCCCGTGTTAAACGGCGGGTCAATATAGATGCACTTAATCTCCC 6632 Query 30827 CTGCATACTCTTGCTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGTTTAT 30886 ||| | ||| || || | || ||||| || | ||||| || ||||||||||| | Sbjct 6631 CTGAAAGCTCATGTTCCAATGCTTTCAACGCCAGCAAGTTGTCACCAAAAATCAGCCGGT 6572 Query 30887 TATCAAAAATATCGTTTTCGGTCAC---TTTCTGGCTGTGGTAAGATTTGCTAGAATCTT 30943 | || || || ||||| || ||||| | || | ||| || || || | ||||| Sbjct 6571 TGTCGAAGATGTCGTTGTCCGTCACGCGATGCTTGGCGTGATACGACTTTTCCGGATCTT 6512 Query 30944 CTAACAAAATGTGTGGCTCTAACTTTTTGCGCTCGTTTTTACCTATCCAGGTAAGTTCTA 31003 | | || ||| | ||||| | ||| |||| | || || ||||| || ||||| | Sbjct 6511 CCAGCAGGATGCGCGGCTCCAGCTTGGGCCGCTTCTCCTTGCCGATCCAAGTCAGTTCAA 6452 Query 31004 ATTTGGTTTTGCTCAT 31019 ||| |||||||| Sbjct 6451 GTTTTTGCTTGCTCAT 6436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 437882547090240