Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1988 114 1e-20 seq105 113 4e-20 >seq1988 Length=7662 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| ||||||| ||| | || |||||||| || || |||| Sbjct 4088 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCGTCT 4147 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| ||| || || ||||| || || || || || || || Sbjct 4148 GACACGATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCGCCAGACCAG 4207 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | || || || ||| | |||||||||||| Sbjct 4208 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTCTCCGATTACAAC 4267 Query 27168 ATTCAAAAGGAGTCGACCTTACA 27190 || || |||||| ||| |||| Sbjct 4268 ATCCAGAAGGAGAGTACCCTACA 4290 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || |||| || ||| |||| || || || ||||| | || Sbjct 4655 CATGCAAATCTTCGTCAAGACGTTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTC 4714 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | ||||| || ||||| ||||| || || || || ||||| || Sbjct 4715 CGACACCATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCA 4774 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| ||||| ||| | || ||| || || | || || ||||| Sbjct 4775 ACAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGTCGTACTCTCTCTGACTACAA 4834 Query 27167 CATTCAAAAGGAG 27179 |||||| |||||| Sbjct 4835 CATTCAGAAGGAG 4847 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| ||||||||||| | || || || || || || | || Sbjct 4370 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAGACCATCACCCTGGAGGTCGAGTCTTCT 4429 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || ||| ||||||||||| || ||||| || || || ||| Sbjct 4430 GATACCATCGACAATGTTAAGGCAAAGATTCAAGACAAGGAGGGCATTCCTCCTGACCAA 4489 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||||| || ||| | || || | ||| | || |||||||| Sbjct 4490 CAACGTCTCATCTTTGCCGGTAAGCAACTTGAGGATGGCCGCACCCTGTCGGATTACAAT 4549 Query 27168 ATTCAAAAGGAGTCGACC 27185 || || |||||||| ||| Sbjct 4550 ATCCAGAAGGAGTCTACC 4567 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| |||||| | || || || ||||| || | || Sbjct 3860 ATGCAGATCTTCGTCAAGACGTTGACGGGCAAGACGATCACCCTCGAAGTCGAGTCCTCT 3919 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || || || ||||| || ||||| || || || || Sbjct 3920 GACACGATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 3979 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | || || || || | || || | ||| |||| || |||||| Sbjct 3980 CAACGTTTGATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGACTACAAC 4039 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||| ||| | || | ||| | ||| |||| || || || Sbjct 4040 ATTCAGAAGGAGAGCACCCTTCACCTCGTTCTTCGTCTGCGTGGAGGAAT 4089 >seq105 Length=629 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || || | ||||| | || || || | ||| Sbjct 380 ATGCAGATCTTTGTCAAGACGCTCACAGGGAAAACCATTACGTTGGAGGTCGAGTCTTCC 439 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || ||||| |||||||| ||||| || |||||||| || Sbjct 440 GACACGATTGACAACGTGAAGGCGAAAATCCAAGACAAGGAAGGAATCCCACCCGACCAG 499 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| ||||| ||| | ||||| | || | ||||| |||||| Sbjct 500 CAACGTCTGATCTTCGCTGGCAAGCAACTCGAAGATGGACGTACACTCTCCGACTACAAC 559 Query 27168 ATTCAAAAGGAG 27179 |||||||||||| Sbjct 560 ATTCAAAAGGAG 571 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| || |||||| | || || | || || || ||||| Sbjct 152 ATGCAAATCTTCGTTAAGACTCTCACGGGCAAGACGATCACCTTGGAGGTCGAGTCGTCC 211 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || |||||||| || ||||| || || |||||| Sbjct 212 GACACTATTGACAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCAGATCAA 271 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| || || || | || || | ||| | || ||||||||| Sbjct 272 CAACGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACTCTCTCTGATTACAAC 331 Query 27168 ATTCAAAAGGAGTCGACC 27185 || || |||||||| ||| Sbjct 332 ATCCAGAAGGAGTCTACC 349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434862137868480