Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq8881 125 2e-24 >seq8881 Length=1866 Score = 125 bits (138), Expect = 2e-24 Identities = 223/320 (70%), Gaps = 8/320 (3%) Strand=Plus/Plus Query 39033 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGCCCGTACGCCG 39092 |||| |||| ||||||| ||| || || | ||| ||||||| | ||| || || | Sbjct 778 ACTCCGCCGTGTAGTGCACCTTGAGCCACCCGGTGTGGTAGGCCAGCAGCGAATAGGCGG 837 Query 39093 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCT 39152 | | ||||| |||||||||| |||| || || || | | | || ||| | ||| | | Sbjct 838 CGGCGTGCGACTTGTTGAAGCCGTAACCCGCAAACTTTTCCATCAGGTCGAAGACCTCGT 897 Query 39153 GGA--TGGCGCTGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTT--CACGAAC 39208 | | | ||| | || || ||| ||| || ||||| ||||| | |||| Sbjct 898 CGGCCTTGTCCTGACTGA-TACCCTTT-TCGGCTGCACCCTTGCGGAAGATGGCACGG-- 953 Query 39209 TCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTGG 39268 | || ||||| |||||| ||| |||||||||||||| || ||||||| |||||| | Sbjct 954 TGCTCGGCCATTTCCTCGGCCTTTTTCTTGCCCATGGCGCGGCGCAGCATGTCGGCGCCG 1013 Query 39269 CCCAGGCTGTAGCCAGCGAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATG 39328 || || ||| ||| | || | |||||||| || | ||||||||||||||||| ||| Sbjct 1014 CCGAGCGAGTAACCACCCAGCACCTGCGCCGTCTGCATCACCTGCTCCTGGTAGACCATG 1073 Query 39329 AGCCCGTACGTCGGGTCCAG 39348 | ||||| ||| | |||| Sbjct 1074 ATGCCGTAGGTCTCGGCCAG 1093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160386686955726