Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq8881 109 2e-19 >seq8881 Length=1866 Score = 109 bits (120), Expect = 2e-19 Identities = 223/322 (69%), Gaps = 12/322 (4%) Strand=Plus/Plus Query 37940 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 37999 |||| |||| ||||||| ||| || || | ||| ||||||| | || || || | Sbjct 778 ACTCCGCCGTGTAGTGCACCTTGAGCCACCCGGTGTGGTAGGCCAGCAGCGAATAGGCGG 837 Query 38000 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCC- 38058 | | ||||| |||||||||| |||| || || || | | | || ||| | ||| | Sbjct 838 CGGCGTGCGACTTGTTGAAGCCGTAACCCGCAAACTTTTCCATCAGGTCGAAGACCTCGT 897 Query 38059 CGGA--TGGCA-GCCTCCGAGTAGCCTCGCTCGCTCGCCCCCTTCTGGAAGTT--CACGA 38113 ||| || | | || || || ||| ||| || ||||| ||||| | |||| Sbjct 898 CGGCCTTGTCCTGACT--GA-TACCCTTTTCGGCT-GCACCCTTGCGGAAGATGGCACGG 953 Query 38114 ACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCT 38173 | || ||||| |||||| ||| ||||||||||||||||| || || | |||||| Sbjct 954 --TGCTCGGCCATTTCCTCGGCCTTTTTCTTGCCCATGGCGCGGCGCAGCATGTCGGCGC 1011 Query 38174 GACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGA 38233 ||||| | ||| || |||| | |||||||| || | ||||||||||||||||| | Sbjct 1012 CGCCGAGCGAGTAACCACCCAGCACCTGCGCCGTCTGCATCACCTGCTCCTGGTAGACCA 1071 Query 38234 TGAGCCCGAAGGTCGGGTCCAG 38255 ||| ||| ||||| | |||| Sbjct 1072 TGATGCCGTAGGTCTCGGCCAG 1093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159695571900318