Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq8881 118 3e-22 >seq8881 Length=1866 Score = 118 bits (130), Expect = 3e-22 Identities = 223/322 (69%), Gaps = 12/322 (4%) Strand=Plus/Plus Query 38373 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 38432 |||| |||| ||||||| ||| || || | ||| ||||||| | || || || | Sbjct 778 ACTCCGCCGTGTAGTGCACCTTGAGCCACCCGGTGTGGTAGGCCAGCAGCGAATAGGCGG 837 Query 38433 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCC 38492 | | ||||| |||||||||| |||| || || || | | | || ||| | ||| | Sbjct 838 CGGCGTGCGACTTGTTGAAGCCGTAACCCGCAAACTTTTCCATCAGGTCGAAGACCTC-- 895 Query 38493 GGATGGCAGCGTCC-GAGT---AGCCTCGCTCGCTTGCTCCCTTCTGGAAGTT--CACGA 38546 | ||| |||| || | | ||| ||| ||| ||||| ||||| | |||| Sbjct 896 -GTCGGCCTTGTCCTGACTGATACCCTTT-TCGGCTGCACCCTTGCGGAAGATGGCACGG 953 Query 38547 ACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCT 38606 | || ||||| |||||| ||| ||||||||||||||||| || || | |||||| Sbjct 954 --TGCTCGGCCATTTCCTCGGCCTTTTTCTTGCCCATGGCGCGGCGCAGCATGTCGGCGC 1011 Query 38607 GACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGA 38666 ||||| | ||| || |||| | |||||||| || | ||||||||||||||||| | Sbjct 1012 CGCCGAGCGAGTAACCACCCAGCACCTGCGCCGTCTGCATCACCTGCTCCTGGTAGACCA 1071 Query 38667 TGAGCCCGAAGGTCGGGTCCAG 38688 ||| ||| ||||| | |||| Sbjct 1072 TGATGCCGTAGGTCTCGGCCAG 1093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160220307405350