Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_028978.1 Length=60609 Score E Sequences producing significant alignments: (Bits) Value seq10123 107 7e-19 seq9051 93.3 2e-14 >seq10123 Length=609 Score = 107 bits (118), Expect = 7e-19 Identities = 197/281 (70%), Gaps = 12/281 (4%) Strand=Plus/Plus Query 55686 TGACCCGCAAGGGCGCG--ATCGACGCGAACGAGGGTGTGCGGGGCCTGATTCCGGGCTC 55743 ||||||||||||||||| |||| || || || || | || ||| | || || ||| Sbjct 210 TGACCCGCAAGGGCGCGGTATCG--GCCAAGGAAGGCGAGCTGGGGATCATCCCCGGCAG 267 Query 55744 GATGGGCACCTGTTCGTATGTCGTGACCGGCAAGGGTAATCCCGAGGCGTTGTGCTCAGC 55803 |||||| | |||| ||||| |||||||| || | |||| || ||||| Sbjct 268 CATGGGCGCGAAGTCGTTCATCGTGCGTGGCAAGGGCAACCGCGAGAGCTTCTGCTCCTG 327 Query 55804 GCCGCACGGTGCGGGCCGCCGGTTCTCGCGCACGAAGGCGCGCAAGCTGTTCACGGTCGA 55863 |||| || || ||||| | | || || | |||||||||||| |||||| ||||| Sbjct 328 CTCGCATGGCGCTGGCCGGAAGATGTCCCGTAACGAGGCGCGCAAGCAGTTCACCGTCGA 387 Query 55864 CGACC---TCGAGGCGCGTATGCAGGGCATCGAGTACCGCAAGGGCGAGGCGTG-GGTCG 55919 |||| ||| | ||| ||| || | |||| |||||||| ||||| ||| | ||| Sbjct 388 GGACCATATCGCG--GCGACTGC-CGGTGTGGAGTGCCGCAAGGACGAGG-GTGTGCTCG 443 Query 55920 ACGAGATTCCCGACGCATACAAGCCGATCGACGTCGTGATG 55960 |||||| |||| || |||||| |||||||| |||||| Sbjct 444 ACGAGACGCCCGCAGCCTACAAGGACATCGACGTGGTGATG 484 >seq9051 Length=1431 Score = 93.3 bits (102), Expect = 2e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 54930 TGCCTTTCGTCTATCCGCATGTGGCGCTGATGCCCGATGCGCATTTCGGCAAGGGCAGCA 54989 |||| ||| || | | || | ||| | |||||||||| || | |||| |||| | Sbjct 836 TGCCCTTCATCCACCGCCACATTGCGATCATGCCCGATGTCCACTGGGGCATGGGCGCGA 895 Query 54990 GTGTCGGCACGGTGATCCCGACCGAGGGCGCCGTCATTCCCGCCGCGGTGGGTGTCGATA 55049 || || |||||||||||||| || |||| |||| || || ||||| || || || | Sbjct 896 CCGTTGGTTCGGTGATCCCGACCAAGAACGCCATCATCCCGGCAGCGGTCGGCGTGGACA 955 Query 55050 TTGGCTGCGGCATGATCGCGGCCCGCACCACGTACACGGCGAACGATCT 55098 | ||||| |||||||| || |||||||| |||||| |||||||| Sbjct 956 TCGGCTGTGGCATGATGGCCCACCGCACCAGCCTCACGGCCAACGATCT 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193803379727398