Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_029075.1 Length=81541 Score E Sequences producing significant alignments: (Bits) Value seq6952 113 2e-20 seq10188 82.4 4e-11 >seq6952 Length=2824 Score = 113 bits (124), Expect = 2e-20 Identities = 155/213 (73%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 52408 CCAGTAGGCGTCATCAACGCCGTAGCTGGCCACTTCCTCGCCGGTCAACTGGCCCATGTG 52467 |||||||||||| || |||||||| || | ||||||||||| | |||||||| Sbjct 2296 CCAGTAGGCGTCGTCCGCGCCGTAGGCACAGACCTGCTCGCCGGTCAGGTCGCCCATGTC 2355 Query 52468 GACCTTGCCGT---CC---AGCGTCTGCTGGAACGTGGCCATGTCGTAGTCGAACCACGA 52521 | ||||| || || ||||| | | ||| |||||||| ||| |||| ||| Sbjct 2356 CTCGGCGCCGTTGTCCTTGAGGACCTGCTCGTAAGTGACCATGTCGAAGTGGAACAGCGA 2415 Query 52522 CTTCAC-AGCACGCTTGAGGTCGTAGCCGATGCGGATGGCGTTGACGAAGCCGTTGTACG 52580 ||| || ||| ||||||| || |||| || |||| | |||||||| |||||||||| Sbjct 2416 CTTGACCAGCTT-CTTGAGGCCGAAGCCCCAGCCGATGTCCTTGACGAACCCGTTGTACG 2474 Query 52581 AGTGCTCGGCGTCCGACTCCTTGGCGATGACCT 52613 || | | ||||| ||||||||| |||||| || Sbjct 2475 AGAACGCCGCGTCGGACTCCTTGCCGATGAACT 2507 >seq10188 Length=536 Score = 82.4 bits (90), Expect = 4e-11 Identities = 99/132 (75%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 45749 AGGCAGCGGTCGAACATATGCGGCGAGACGGTGCCTTCGGCCAGGTTGAACTTGACGGCG 45808 |||||||||||||| | | |||||||||||| ||| || ||||||||| ||| Sbjct 153 AGGCAGCGGTCGAAGAAGTCGTCCGAGACGGTGCCAGTGGCGTAGTCGAACTTGACAGCG 212 Query 45809 GCGATCTGAATGATCGCGGT-CGTTTCCGGCTGCGTGCCAGTGGTTTCCAAGTCAACCAT 45867 |||||||| ||||||||| | || | | || || || |||||||| | ||| ||||| Sbjct 213 GCGATCTGGATGATCGCGTTGCGCTCGTAGTTG-GTTCCGGTGGTTTCGATGTCCACCAT 271 Query 45868 AACGTCGGGGAA 45879 ||||| |||| Sbjct 272 CACGTCATGGAA 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260773504896278