Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1988 170 4e-37 seq105 168 2e-36 seq4155 111 4e-19 seq2768 87.8 4e-12 seq3402 84.2 5e-11 >seq1988 Length=7662 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||| || || ||| || |||||||| ||||| | ||||| | ||||| || | Sbjct 4295 CAAGGTGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAA 4236 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||| |||||||| || || || ||||| || |||| || ||||||||||||| Sbjct 4235 GCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGA 4176 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 ||||| || ||||| ||||| |||||||| || ||||| |||||||| ||||||| Sbjct 4175 TCTTTGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTC 4116 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCATT 211115 | || | |||||| || || | ||||||| Sbjct 4115 CGGTCAAAGTCTTGACGAAGATCTGCATT 4087 Score = 163 bits (180), Expect = 7e-35 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || |||||||| ||| ||| || || ||||| || || | ||| Sbjct 4084 TCCACGCAGACGAAGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAG 4025 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | ||||| || |||||||| || || ||||| | ||||| ||||||||||||| Sbjct 4024 GGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGAAT 3965 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||||||||||||||| || || || ||||| ||||||||| || || || Sbjct 3964 GCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGACTTC 3905 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||||||||| ||||| | ||||| || || | |||||| Sbjct 3904 GAGGGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 Score = 159 bits (176), Expect = 8e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| || || ||| ||| || ||||| || ||||||| || || | |||||||| | Sbjct 3782 CAAGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGA 3723 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||| |||||||| || || || ||||| || |||| || |||||||| |||| Sbjct 3722 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGA 3663 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 ||||| || ||||| || ||||| || ||| || |||||||| ||||| ||||| | Sbjct 3662 TCTTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGC 3603 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || || |||||||| || | |||||| Sbjct 3602 CAGTCAGGGTCTTTACGAAGATCTGCAT 3575 Score = 159 bits (176), Expect = 8e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||| || || ||||| || ||||| || ||||||| ||||| | ||||| || | Sbjct 4577 CAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAA 4518 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 | ||||| || || ||||| || ||||||||||||||||||| || |||||||| || | Sbjct 4517 GTTGCTTACCGGCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAA 4458 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 ||||| || || || |||||||| ||||| || ||||| || ||||| ||||| | Sbjct 4457 TCTTTGCCTTAACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGC 4398 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || | |||||| || || | |||||| Sbjct 4397 CGGTCAAAGTCTTCACGAAGATCTGCAT 4370 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || || ||| || || ||||| || || | || || | || || Sbjct 4867 AGGACAAGGTGGAGCGTACTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTACGACCGTCC 4808 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| || || |||||||| ||||| | || ||||||||| Sbjct 4807 TCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCC 4748 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||||||||| || || |||||||| ||||| ||| Sbjct 4747 TGAATCTTGGCCTTGACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 4688 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | ||||| || || | ||||| Sbjct 4687 TTACCCGTCAACGTCTTGACGAAGATTTGCAT 4656 >seq105 Length=629 Score = 168 bits (186), Expect = 2e-36 Identities = 170/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| |||||||| || ||||| || |||||||| ||||| | || ||| Sbjct 372 CGAAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTC 313 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || |||||||| || |||||||| || |||||||| || || |||| || Sbjct 312 CGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCTGGGGGAATGCCC 253 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| |||||||| ||||| || || || ||||| || || ||||| | Sbjct 252 TCCTTGTCTTGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCGACCTCCAAG 193 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| |||||||||||||| || || | ||||| Sbjct 192 GTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATTTGCAT 152 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||||||||| || ||| ||||| ||||| || || | || || | ||||||||| | Sbjct 587 CAAGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGA 528 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 | |||||||| |||||||| || ||||| ||||| || || | |||||||||||| |||| Sbjct 527 GTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGA 468 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 | || |||||||| || || ||||| || || ||||| | || || || || | Sbjct 467 TTTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCC 408 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCATT 211115 | ||||| ||||| ||||| | ||||||| Sbjct 407 CTGTGAGCGTCTTGACAAAGATCTGCATT 379 Score = 89.7 bits (98), Expect = 1e-12 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||||||||||||||| || |||||||| ||||||| | ||| | ||||| |||| Sbjct 79 CAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGACAAGGTACGACCATCCTCCA 20 Query 210967 GCTGCTTGCCTGCGAAGAT 210985 ||||||||| |||||||| Sbjct 19 ACTGCTTGCCAGCGAAGAT 1 >seq4155 Length=6849 Score = 111 bits (122), Expect = 4e-19 Identities = 92/111 (83%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||||||||||| || ||||| || || | |||||||| || || Sbjct 91 AGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTCCTGCCGTCC 150 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || |||||||| || |||||||| || |||||||||||||| |||| |||| Sbjct 151 TCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGGTCAGGCGGAA-TCCT 200 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || |||||||| || ||||| || || || || |||||||| ||| ||||||||| Sbjct 256 CCCTCCTTGTCTTGAATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCG 315 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| |||||||| || |||||||| || || | |||||| Sbjct 316 AGAGTGATGGTCTTTCCAGTAAGAGTCTTAACGAAGATCTGCAT 359 >seq2768 Length=3315 Score = 87.8 bits (96), Expect = 4e-12 Identities = 85/107 (79%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 ||||| | |||||| || ||||| || ||||| || || || | ||| | |||| ||||| Sbjct 2819 AGGACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCACTCAAAG-TCCTGCCATC 2877 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 || ||||||||||| |||||||| || |||||||| || || |||| Sbjct 2878 CTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGTTGATCGGGCGGAA 2924 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| ||| || || ||||||||||| || || ||||| Sbjct 2991 CCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCA 3050 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| ||||| ||||| || ||||| || || | |||||| || Sbjct 3051 AGGGTGATGGTCTTCCCCGTAAGGGTCTTGACGAAGATCTGCATCTT 3097 >seq3402 Length=1793 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||| || ||||| ||||||||||| ||||| || || | ||||| Sbjct 1395 AGGACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTGAGAGTGCGACCATCC 1454 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||||||||| |||||||| || || || ||||| || || Sbjct 1455 TCGAGCTGCTTGCCCGCGAAGATCAGTCGCTGCTGGTCGGGGGG 1498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158998300429385